RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 CDK5RAP2Q96SN8 1893 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 PPIP5K2O43314 1243 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 SAFBQ15424 915 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAB5B-210ENST00000553116 SF3A1Q15459 793 aaKnown RBP9.6□□□□□ -0.87
RAB5B-210ENST00000553116 CCDC183Q5T5S1 534 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 GAS2L3Q86XJ1 694 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 CERS5Q8N5B7 392 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 TEKT1Q969V4 418 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 FTOQ9C0B1 505 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAB5B-210ENST00000553116 KAT14Q9H8E8 782 aa9.6□□□□□ -0.87
RAB5B-210ENST00000553116 FSD2A1L4K1 749 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 FMNL1O95466 1100 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-210ENST00000553116 IFNAR1P17181 557 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 PLCD1P51178 756 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 TTLL6Q8N841 843 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-210ENST00000553116 STX8Q9UNK0 236 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 BAZ2BQ9UIF8 2168 aaKnown RBP9.59□□□□□ -0.87
RAB5B-210ENST00000553116 GAKO14976 1311 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 ELP1O95163 1332 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 ECM29Q5VYK3 1845 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 ZBTB7AO95365 584 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 FGRP09769 529 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 CALM1P0DP23 149 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 CALM2P0DP24 149 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 CALM3P0DP25 149 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 ME1P48163 572 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 ZNF445P59923 1031 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 STK38Q15208 465 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 NTRK3Q16288 839 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 KRT40Q6A162 431 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 SUPT20HQ8NEM7 779 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 ANP32BQ92688 251 aaKnown RBP9.59□□□□□ -0.87
RAB5B-210ENST00000553116 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 KCNQ5Q9NR82 932 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 USP40Q9NVE5 1235 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 DEXIO95424 95 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 RCAN1P53805 252 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 BRAPQ7Z569 592 aa9.59□□□□□ -0.87
RAB5B-210ENST00000553116 FAM163AQ96GL9 167 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-210ENST00000553116 RBM28Q9NW13 759 aaKnown RBP9.59□□□□□ -0.87
RAB5B-210ENST00000553116 MKRN1Q9UHC7 482 aaKnown RBP9.59□□□□□ -0.87
RAB5B-210ENST00000553116 UBE2Q2LH0YL09 131 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 XRCC6P12956 609 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAB5B-210ENST00000553116 RHBDL3P58872 404 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 TMEM132AQ24JP5 1023 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 CC2D2BQ6DHV5 1058 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 PIBF1Q8WXW3 757 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 STK36Q9NRP7 1315 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 DDAH1O94760 285 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 XBP1P17861 261 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 PPP2R5BQ15173 497 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 LRSAM1Q6UWE0 723 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
RAB5B-210ENST00000553116 CRKP46108 304 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 KIF23Q02241 960 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-210ENST00000553116 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 hCG_1642624A0A1W2PR95 340 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 PLEKHA8P1O95397 391 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 DPEP1P16444 411 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 POLD1P28340 1107 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 GUCY1A2P33402 732 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 CDK8P49336 464 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 STRIP1Q5VSL9 837 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 ATL3Q6DD88 541 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 CRACR2BQ8N4Y2 399 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-210ENST00000553116 PANK2Q9BZ23 570 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 KCNJ14Q9UNX9 436 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 ATF5Q9Y2D1 282 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-210ENST00000553116 MYH8P13535 1937 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 C10orf71Q711Q0 1435 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 ADAMTSL1Q8N6G6 1762 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 NID2Q14112 1375 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 ROBO3Q96MS0 1386 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 KIF28PB7ZC32 967 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 KIF5BP33176 963 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 NASPP49321 788 aaPredicted RBP9.57□□□□□ -0.88
RAB5B-210ENST00000553116 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 RNF214Q8ND24 703 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 PNMA1Q8ND90 353 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 TSPY26PQ9H489 355 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 DLEC1Q9Y238 1755 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 SCN9AQ15858 1988 aa9.57□□□□□ -0.88
RAB5B-210ENST00000553116 LETM1O95202 739 aaPredicted RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 HLA-DOAP06340 250 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 LIG1P18858 919 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 KIAA2012Q0VF49 1180 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 TROAPQ12815 778 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 HSP90AA2PQ14568 343 aaPredicted RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 CAMK4Q16566 473 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 CCDC73Q6ZRK6 1079 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 ILDR1Q86SU0 546 aaPredicted RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 LARGE2Q8N3Y3 721 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 RNF26Q9BY78 433 aaPredicted RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 NUP62CLQ9H1M0 184 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms