RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DBNDD2Q9BQY9 259 aa14.51□□□□□ -0.09
CKAP4-202ENST00000552828 TAOK2Q9UL54 1235 aa14.51□□□□□ -0.09
CKAP4-202ENST00000552828 NOP58Q9Y2X3 529 aaKnown RBP14.51□□□□□ -0.09
CKAP4-202ENST00000552828 XRCC5P13010 732 aaKnown RBP14.5□□□□□ -0.09
CKAP4-202ENST00000552828 MNX1P50219 401 aaPredicted RBP14.5□□□□□ -0.09
CKAP4-202ENST00000552828 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
CKAP4-202ENST00000552828 MAPKAPK5Q8IW41 473 aa14.5□□□□□ -0.09
CKAP4-202ENST00000552828 GPRC5AQ8NFJ5 357 aa14.5□□□□□ -0.09
CKAP4-202ENST00000552828 HMX1Q9NP08 348 aaPredicted RBP14.5□□□□□ -0.09
CKAP4-202ENST00000552828 TMOD4Q9NZQ9 345 aa14.5□□□□□ -0.09
CKAP4-202ENST00000552828 RCAN3Q9UKA8 241 aa14.5□□□□□ -0.09
CKAP4-202ENST00000552828 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
CKAP4-202ENST00000552828 USP17L10C9JJH3 530 aa14.49□□□□□ -0.09
CKAP4-202ENST00000552828 HERVK_113P62684 666 aa14.49□□□□□ -0.09
CKAP4-202ENST00000552828 IRX3P78415 501 aaPredicted RBP14.49□□□□□ -0.09
CKAP4-202ENST00000552828 TRIM32Q13049 653 aa14.49□□□□□ -0.09
CKAP4-202ENST00000552828 DIS3LQ8TF46 1054 aaKnown RBP14.49□□□□□ -0.09
CKAP4-202ENST00000552828 TXNRD2Q9NNW7 524 aa14.49□□□□□ -0.09
CKAP4-202ENST00000552828 PIH1D3Q9NQM4 214 aaKnown RBP14.49□□□□□ -0.09
CKAP4-202ENST00000552828 RBPJLQ9UBG7 517 aa14.49□□□□□ -0.09
CKAP4-202ENST00000552828 OGDHLQ9ULD0 1010 aa14.49□□□□□ -0.09
CKAP4-202ENST00000552828 SURF6O75683 361 aaKnown RBP14.48□□□□□ -0.09
CKAP4-202ENST00000552828 ZAP70P43403 619 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 SHROOM1Q2M3G4 852 aaPredicted RBP14.48□□□□□ -0.09
CKAP4-202ENST00000552828 CERS3Q8IU89 383 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 CRACR2BQ8N4Y2 399 aaPredicted RBP14.48□□□□□ -0.09
CKAP4-202ENST00000552828 GTF3C2Q8WUA4 911 aaPredicted RBP14.48□□□□□ -0.09
CKAP4-202ENST00000552828 SOCS4Q8WXH5 440 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 TRIB2Q92519 343 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 USP6NLQ92738 828 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 NBPF3Q9H094 633 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 EMILIN3Q9NT22 766 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 DBNLQ9UJU6 430 aaKnown RBP14.48□□□□□ -0.09
CKAP4-202ENST00000552828 ZBTB21Q9ULJ3 1066 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 SIPA1L1O43166 1804 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 DOCK3Q8IZD9 2030 aa14.48□□□□□ -0.09
CKAP4-202ENST00000552828 MAPK4P31152 587 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 BMP8BP34820 402 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 OS9Q13438 667 aaPredicted RBP14.47□□□□□ -0.09
CKAP4-202ENST00000552828 TATDN1Q6P1N9 297 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 TMED8Q6PL24 325 aaPredicted RBP14.47□□□□□ -0.09
CKAP4-202ENST00000552828 POTEEQ6S8J3 1075 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 FTSJ3Q8IY81 847 aaKnown RBP14.47□□□□□ -0.09
CKAP4-202ENST00000552828 TRMT44Q8IYL2 757 aaKnown RBP14.47□□□□□ -0.09
CKAP4-202ENST00000552828 GDF15Q99988 308 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 NUDT12Q9BQG2 462 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 STAP2Q9UGK3 403 aa14.47□□□□□ -0.09
CKAP4-202ENST00000552828 PEX10O60683 326 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 GDF11O95390 407 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 HLA-DOAP06340 250 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 CYP2B6P20813 491 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 ERVK-24P63145 666 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 DYNLL1P63167 89 aaKnown RBP14.46□□□□□ -0.09
CKAP4-202ENST00000552828 Q3C1V9 767 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 MORN1Q5T089 497 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 EAF2Q96CJ1 260 aaPredicted RBP14.46□□□□□ -0.09
CKAP4-202ENST00000552828 C12orf42Q96LP6 360 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 EHD4Q9H223 541 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 MAST2Q6P0Q8 1798 aa14.46□□□□□ -0.09
CKAP4-202ENST00000552828 ATAD5Q96QE3 1844 aa14.45□□□□□ -0.1
CKAP4-202ENST00000552828 SOX1O00570 391 aaPredicted RBP14.45□□□□□ -0.1
CKAP4-202ENST00000552828 MS4A1P11836 297 aa14.45□□□□□ -0.1
CKAP4-202ENST00000552828 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
CKAP4-202ENST00000552828 CYP7A1P22680 504 aa14.45□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L2Q6R6M4 530 aa14.45□□□□□ -0.1
CKAP4-202ENST00000552828 C11orf49Q9H6J7 331 aa14.45□□□□□ -0.1
CKAP4-202ENST00000552828 TLR7Q9NYK1 1049 aaKnown RBP14.45□□□□□ -0.1
CKAP4-202ENST00000552828 SAP30BPQ9UHR5 308 aaKnown RBP14.45□□□□□ -0.1
CKAP4-202ENST00000552828 A0A0C4DFX4 3053 aa14.45□□□□□ -0.1
CKAP4-202ENST00000552828 PLXNB2O15031 1838 aa14.44□□□□□ -0.1
CKAP4-202ENST00000552828 COL6A3P12111 3177 aa14.44□□□□□ -0.1
CKAP4-202ENST00000552828 GH2P01242 217 aa14.44□□□□□ -0.1
CKAP4-202ENST00000552828 CACNB2Q08289 660 aaPredicted RBP14.44□□□□□ -0.1
CKAP4-202ENST00000552828 PDE3AQ14432 1141 aa14.44□□□□□ -0.1
CKAP4-202ENST00000552828 GPR142Q7Z601 462 aa14.44□□□□□ -0.1
CKAP4-202ENST00000552828 CCDC8Q9H0W5 538 aaPredicted RBP14.44□□□□□ -0.1
CKAP4-202ENST00000552828 PORCNQ9H237 461 aa14.44□□□□□ -0.1
CKAP4-202ENST00000552828 C1orf115Q9H7X2 142 aa14.44□□□□□ -0.1
CKAP4-202ENST00000552828 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
CKAP4-202ENST00000552828 COL6A1P12109 1028 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 ZKSCAN1P17029 563 aaPredicted RBP14.43□□□□□ -0.1
CKAP4-202ENST00000552828 RGS2P41220 211 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 LHX8Q68G74 356 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 GPR153Q6NV75 609 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 PLEKHH3Q7Z736 793 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 C7orf61Q8IZ16 206 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 RABGAP1Q9Y3P9 1069 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 FOCADQ5VW36 1801 aa14.43□□□□□ -0.1
CKAP4-202ENST00000552828 PFASO15067 1338 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L15C9J2P7 530 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L13C9JLJ4 530 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L11C9JVI0 530 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L18D6R9N7 530 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L22D6RA61 530 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L17D6RBQ6 530 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L19D6RCP7 530 aa14.42□□□□□ -0.1
CKAP4-202ENST00000552828 USP17L20D6RJB6 530 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms