RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MFSD14BQ5SR56 506 aa11.51□□□□□ -0.57
TMEM116-216ENST00000552800 APOA5Q6Q788 366 aa11.51□□□□□ -0.57
TMEM116-216ENST00000552800 DEFB132Q7Z7B7 95 aa11.51□□□□□ -0.57
TMEM116-216ENST00000552800 DZIP1Q86YF9 867 aaKnown RBP11.51□□□□□ -0.57
TMEM116-216ENST00000552800 RTKN2Q8IZC4 609 aa11.51□□□□□ -0.57
TMEM116-216ENST00000552800 ELP1O95163 1332 aa11.51□□□□□ -0.57
TMEM116-216ENST00000552800 NEDD4P46934 1319 aa11.51□□□□□ -0.57
TMEM116-216ENST00000552800 STK36Q9NRP7 1315 aa11.51□□□□□ -0.57
TMEM116-216ENST00000552800 DDX60LQ5H9U9 1706 aaKnown RBP11.5□□□□□ -0.57
TMEM116-216ENST00000552800 LAMB1P07942 1786 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 B4E1Z4 1266 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
TMEM116-216ENST00000552800 IFNAR1P17181 557 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 FGD1P98174 961 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 CHAF1AQ13111 956 aaPredicted RBP11.5□□□□□ -0.57
TMEM116-216ENST00000552800 SOGA3Q5TF21 947 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 SLC51AQ86UW1 340 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 DGKHQ86XP1 1220 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 AATFQ9NY61 560 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMEM116-216ENST00000552800 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
TMEM116-216ENST00000552800 MYO3BQ8WXR4 1341 aa11.5□□□□□ -0.57
TMEM116-216ENST00000552800 CCDC196A0A1B0GTZ2 297 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 TBC1D12O60347 775 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 KDM4AO75164 1064 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 CDKL5O76039 1030 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 PDE4BQ07343 736 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 ARSIQ5FYB1 569 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 NOL8Q76FK4 1167 aaKnown RBP11.49□□□□□ -0.57
TMEM116-216ENST00000552800 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-216ENST00000552800 CERS5Q8N5B7 392 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 TTLL6Q8N841 843 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 FBXO18Q8NFZ0 1043 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM116-216ENST00000552800 ZNF622Q969S3 477 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM116-216ENST00000552800 ZDHHC15Q96MV8 337 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 ZNF287Q9HBT7 754 aa11.49□□□□□ -0.57
TMEM116-216ENST00000552800 KLF18A0A0U1RQI7 1052 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 IFIT3O14879 490 aaKnown RBP11.48□□□□□ -0.57
TMEM116-216ENST00000552800 MBD3O95983 291 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 CALM1P0DP23 149 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 CALM2P0DP24 149 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 CALM3P0DP25 149 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 ADD1P35611 737 aaKnown RBP11.48□□□□□ -0.57
TMEM116-216ENST00000552800 GTF2IP78347 998 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 GABPAQ06546 454 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 TROAPQ12815 778 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 TMEM67Q5HYA8 995 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 MSL1Q68DK7 614 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 METTL16Q86W50 562 aaKnown RBP11.48□□□□□ -0.57
TMEM116-216ENST00000552800 ZSCAN10Q96SZ4 725 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-216ENST00000552800 NOL10Q9BSC4 688 aaKnown RBP11.48□□□□□ -0.57
TMEM116-216ENST00000552800 IDI2Q9BXS1 227 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
TMEM116-216ENST00000552800 MORC2Q9Y6X9 1032 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-216ENST00000552800 BRCA1P38398 1863 aaKnown RBP11.47□□□□□ -0.57
TMEM116-216ENST00000552800 FSD2A1L4K1 749 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 PTPDC1A2A3K4 754 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 ZBTB43O43298 467 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 JAK2O60674 1132 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 BTDP43251 543 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 FUT2Q10981 343 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 RESTQ13127 1097 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 WTAPQ15007 396 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 MCTP1Q6DN14 999 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 APOBEC3HQ6NTF7 200 aaKnown RBP11.47□□□□□ -0.57
TMEM116-216ENST00000552800 CPLX2Q6PUV4 134 aaKnown RBP11.47□□□□□ -0.57
TMEM116-216ENST00000552800 C16orf86Q6ZW13 317 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 IQCA1Q86XH1 822 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 FANCBQ8NB91 859 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 SH3RF3Q8TEJ3 882 aaPredicted RBP11.47□□□□□ -0.57
TMEM116-216ENST00000552800 GPR101Q96P66 508 aaPredicted RBP11.47□□□□□ -0.57
TMEM116-216ENST00000552800 PDGFDQ9GZP0 370 aaPredicted RBP11.47□□□□□ -0.57
TMEM116-216ENST00000552800 SCAND2PQ9GZW5 306 aaPredicted RBP11.47□□□□□ -0.57
TMEM116-216ENST00000552800 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 CD2APQ9Y5K6 639 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 SLC12A7Q9Y666 1083 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 SCN9AQ15858 1988 aa11.47□□□□□ -0.57
TMEM116-216ENST00000552800 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-216ENST00000552800 ERICH2A1L162 156 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 USP17L3A6NCW0 530 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 USP17L4A6NCW7 530 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 DDAH1O94760 285 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 VIL1P09327 827 aaKnown RBP11.46□□□□□ -0.57
TMEM116-216ENST00000552800 CHRNA5P30532 468 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 ZNF445P59923 1031 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 STK3Q13188 491 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 DIXDC1Q155Q3 683 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 CCDC93Q567U6 631 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 USP17L1Q7RTZ2 530 aa11.46□□□□□ -0.57
TMEM116-216ENST00000552800 NBPF11Q86T75 865 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms