RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 TCP10Q12799 353 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 FUCA2Q9BTY2 467 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 FOXN1O15353 648 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 ATP5JP18859 108 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 KIF23Q02241 960 aaPredicted RBP16.99■□□□□ 0.31
LETMD1-235ENST00000552739 ADGRA1Q86SQ6 560 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 CLMNQ96JQ2 1002 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 JAKMIP1Q96N16 626 aaKnown RBP16.99■□□□□ 0.31
LETMD1-235ENST00000552739 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
LETMD1-235ENST00000552739 SIPA1L1O43166 1804 aa16.98■□□□□ 0.31
LETMD1-235ENST00000552739 ATRNL1Q5VV63 1379 aa16.98■□□□□ 0.31
LETMD1-235ENST00000552739 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
LETMD1-235ENST00000552739 PTH1RQ03431 593 aa16.98■□□□□ 0.31
LETMD1-235ENST00000552739 TTF1Q15361 905 aaPredicted RBP16.98■□□□□ 0.31
LETMD1-235ENST00000552739 MTERF4Q7Z6M4 381 aaKnown RBP16.98■□□□□ 0.31
LETMD1-235ENST00000552739 ZFPM1Q8IX07 1006 aa16.98■□□□□ 0.31
LETMD1-235ENST00000552739 ANKRD13AQ8IZ07 590 aa16.98■□□□□ 0.31
LETMD1-235ENST00000552739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
LETMD1-235ENST00000552739 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
LETMD1-235ENST00000552739 DDX60LQ5H9U9 1706 aaKnown RBP16.97■□□□□ 0.31
LETMD1-235ENST00000552739 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
LETMD1-235ENST00000552739 TPM3P06753 285 aa16.97■□□□□ 0.31
LETMD1-235ENST00000552739 GJB2P29033 226 aa16.97■□□□□ 0.31
LETMD1-235ENST00000552739 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
LETMD1-235ENST00000552739 TMED8Q6PL24 325 aaPredicted RBP16.97■□□□□ 0.31
LETMD1-235ENST00000552739 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
LETMD1-235ENST00000552739 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
LETMD1-235ENST00000552739 MAP3K12Q12852 859 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 PICALMQ13492 652 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 DOCK1Q14185 1865 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 SPRYD7Q5W111 196 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 SASS6Q6UVJ0 657 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 RNF214Q8ND24 703 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
LETMD1-235ENST00000552739 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.31
LETMD1-235ENST00000552739 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 NAV1Q8NEY1 1877 aa16.96■□□□□ 0.31
LETMD1-235ENST00000552739 GOLIM4O00461 696 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 DYNC1I1O14576 645 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 BAG3O95817 575 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 PPP4CP60510 307 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 VGLL4Q14135 290 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.3
LETMD1-235ENST00000552739 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.3
LETMD1-235ENST00000552739 SLC10A4Q96EP9 437 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 HAUS7Q99871 368 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.3
LETMD1-235ENST00000552739 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.3
LETMD1-235ENST00000552739 MYH1P12882 1939 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 CA12O43570 354 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 LARGE1O95461 756 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 ZBTB48P10074 688 aaPredicted RBP16.95■□□□□ 0.3
LETMD1-235ENST00000552739 PLCG2P16885 1265 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 CYP7A1P22680 504 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
LETMD1-235ENST00000552739 KRT32Q14532 448 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 TEX11Q8IYF3 940 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 WNK4Q96J92 1243 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 CSRNP1Q96S65 589 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 ZNF341Q9BYN7 854 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 BOLA2Q9H3K6 86 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 PAG1Q9NWQ8 432 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 ATAD5Q96QE3 1844 aa16.95■□□□□ 0.3
LETMD1-235ENST00000552739 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
LETMD1-235ENST00000552739 HSPA8P11142 646 aaKnown RBP16.94■□□□□ 0.3
LETMD1-235ENST00000552739 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
LETMD1-235ENST00000552739 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
LETMD1-235ENST00000552739 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
LETMD1-235ENST00000552739 CCDC83Q8IWF9 413 aa16.94■□□□□ 0.3
LETMD1-235ENST00000552739 PIBF1Q8WXW3 757 aa16.94■□□□□ 0.3
LETMD1-235ENST00000552739 EDC3Q96F86 508 aaKnown RBP16.94■□□□□ 0.3
LETMD1-235ENST00000552739 WRNIP1Q96S55 665 aa16.94■□□□□ 0.3
LETMD1-235ENST00000552739 USP25Q9UHP3 1055 aa16.94■□□□□ 0.3
LETMD1-235ENST00000552739 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
LETMD1-235ENST00000552739 SLC27A2O14975 620 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 KRT85P78386 507 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 MKRN3Q13064 507 aaKnown RBP16.93■□□□□ 0.3
LETMD1-235ENST00000552739 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
LETMD1-235ENST00000552739 MIGA2Q7L4E1 593 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 OSBPL5Q9H0X9 879 aaPredicted RBP16.93■□□□□ 0.3
LETMD1-235ENST00000552739 ELP3Q9H9T3 547 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 CSADQ9Y600 493 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.93■□□□□ 0.34e-7■■■■□ 21.7
LETMD1-235ENST00000552739 KDM4AO75164 1064 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 PDE6AP16499 860 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 GJA5P36382 358 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 ME3Q16798 604 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 CERS3Q8IU89 383 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 ZSCAN29Q8IWY8 852 aaPredicted RBP16.93■□□□□ 0.3
LETMD1-235ENST00000552739 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 SNCAIPQ9Y6H5 919 aa16.93■□□□□ 0.3
LETMD1-235ENST00000552739 RPS6KB1P23443 525 aa16.92■□□□□ 0.3
LETMD1-235ENST00000552739 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
LETMD1-235ENST00000552739 SLC9C2Q5TAH2 1124 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms