RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 ADGRA2Q96PE1 1338 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 CCL5P13501 91 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 CAPN2P17655 700 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 FLT3LGP49771 235 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 USP14P54578 494 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 BACE1P56817 501 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 DYNLL1P63167 89 aaKnown RBP13.41□□□□□ -0.26
ATF1-204ENST00000552487 MOGSQ13724 837 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 DPF3Q92784 378 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 ASCC2Q9H1I8 757 aaPredicted RBP13.41□□□□□ -0.26
ATF1-204ENST00000552487 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.41□□□□□ -0.26
ATF1-204ENST00000552487 ZBTB21Q9ULJ3 1066 aa13.41□□□□□ -0.26
ATF1-204ENST00000552487 GOLIM4O00461 696 aa13.4□□□□□ -0.26
ATF1-204ENST00000552487 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
ATF1-204ENST00000552487 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
ATF1-204ENST00000552487 CCNA1P78396 465 aa13.4□□□□□ -0.26
ATF1-204ENST00000552487 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.26
ATF1-204ENST00000552487 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
ATF1-204ENST00000552487 GH2P01242 217 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
ATF1-204ENST00000552487 GJB1P08034 283 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 SLURP2P0DP57 97 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 IRF5Q13568 498 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 ABCB5Q2M3G0 1257 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 ADGRA1Q86SQ6 560 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATF1-204ENST00000552487 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 LRRCC1Q9C099 1032 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 EHD4Q9H223 541 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 MCM9Q9NXL9 1143 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
ATF1-204ENST00000552487 DOCK1Q14185 1865 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 MAST2Q6P0Q8 1798 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 FARP2O94887 1054 aaPredicted RBP13.38□□□□□ -0.27
ATF1-204ENST00000552487 INHAP05111 366 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 PDE6AP16499 860 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 ZYXQ15942 572 aaKnown RBP13.38□□□□□ -0.27
ATF1-204ENST00000552487 LRRFIP1Q32MZ4 808 aaKnown RBP13.38□□□□□ -0.27
ATF1-204ENST00000552487 SH3D19Q5HYK7 790 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 WDR78Q5VTH9 848 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 PAGR1Q9BTK6 254 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 SH2D4AQ9H788 454 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 PAG1Q9NWQ8 432 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 IVNS1ABPQ9Y6Y0 642 aa13.38□□□□□ -0.27
ATF1-204ENST00000552487 HMGCRP04035 888 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 ELNP15502 786 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 MAPK4P31152 587 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 GJA8P48165 433 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 CAP1Q01518 475 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 MTFR1Q15390 333 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 TRMT44Q8IYL2 757 aaKnown RBP13.37□□□□□ -0.27
ATF1-204ENST00000552487 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 ANTXR1Q9H6X2 564 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 GABRQQ9UN88 632 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
ATF1-204ENST00000552487 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 CTGFP29279 349 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
ATF1-204ENST00000552487 HERVK_113P62684 666 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 METTL16Q86W50 562 aaKnown RBP13.36□□□□□ -0.27
ATF1-204ENST00000552487 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
ATF1-204ENST00000552487 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
ATF1-204ENST00000552487 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
ATF1-204ENST00000552487 DEFB118Q96PH6 123 aa13.35□□□□□ -0.27
ATF1-204ENST00000552487 UNC93B1Q9H1C4 597 aa13.35□□□□□ -0.27
ATF1-204ENST00000552487 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
ATF1-204ENST00000552487 HMX1Q9NP08 348 aaPredicted RBP13.35□□□□□ -0.27
ATF1-204ENST00000552487 SWAP70Q9UH65 585 aa13.35□□□□□ -0.27
ATF1-204ENST00000552487 MBD4O95243 580 aa13.34□□□□□ -0.27
ATF1-204ENST00000552487 ATP5JP18859 108 aa13.34□□□□□ -0.27
ATF1-204ENST00000552487 RGS2P41220 211 aa13.34□□□□□ -0.27
ATF1-204ENST00000552487 P2RX7Q99572 595 aaKnown RBP13.34□□□□□ -0.27
ATF1-204ENST00000552487 TANGO6Q9C0B7 1094 aa13.34□□□□□ -0.27
ATF1-204ENST00000552487 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
ATF1-204ENST00000552487 ATP8A2Q9NTI2 1148 aa13.34□□□□□ -0.27
ATF1-204ENST00000552487 MORF4L1Q9UBU8 362 aa13.34□□□□□ -0.27
ATF1-204ENST00000552487 EVI5O60447 810 aa13.33□□□□□ -0.28
ATF1-204ENST00000552487 SGPL1O95470 568 aa13.33□□□□□ -0.28
ATF1-204ENST00000552487 CYP2B6P20813 491 aa13.33□□□□□ -0.28
ATF1-204ENST00000552487 ERVK-9P63128 1117 aa13.33□□□□□ -0.28
ATF1-204ENST00000552487 ERVK-24P63145 666 aa13.33□□□□□ -0.28
ATF1-204ENST00000552487 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.28
ATF1-204ENST00000552487 TATDN1Q6P1N9 297 aa13.33□□□□□ -0.28
ATF1-204ENST00000552487 TMEM179Q6ZVK1 233 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms