RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 DACT2Q5SW24 774 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 RASGRP4Q8TDF6 673 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 PLIN2Q99541 437 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 ZNF70Q9UC06 446 aaPredicted RBP9.48□□□□□ -0.89
CHPT1-208ENST00000552215 BRPF3Q9ULD4 1205 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 TAF1P21675 1872 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 YBX3P16989 372 aaKnown RBP eCLIP9.48□□□□□ -0.893e-11■□□□□ 10.3
CHPT1-208ENST00000552215 DNM1Q05193 864 aaKnown RBP9.48□□□□□ -0.89
CHPT1-208ENST00000552215 SCRN1Q12765 414 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 ISM2Q6H9L7 571 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 GADL1Q6ZQY3 521 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
CHPT1-208ENST00000552215 ADM5C9JUS6 153 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 SYT1P21579 422 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 NAPAP54920 295 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 SPECC1Q5M775 1068 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 NBPF12Q5TAG4 269 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 JAKMIP3Q5VZ66 844 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 CEP95Q96GE4 821 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 ZSWIM6Q9HCJ5 1215 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 CNPY2Q9Y2B0 182 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 PARP1P09874 1014 aaKnown RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 SPP2Q13103 211 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 KIF2CQ99661 725 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 ZNF541Q9H0D2 1346 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 BRMS1Q9HCU9 246 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 SH2B1Q9NRF2 756 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 ABT1Q9ULW3 272 aaKnown RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 ZHX2Q9Y6X8 837 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 COL22A1Q8NFW1 1626 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 TMEM232C9JQI7 657 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 DGKZQ13574 1117 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 TRPM4Q8TD43 1214 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 WNT10BO00744 389 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 CDKL5O76039 1030 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 PLEKHA8P1O95397 391 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 PDCP20941 246 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 PDIA3P30101 505 aaKnown RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 ZNF384Q8TF68 577 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 RIOK1Q9BRS2 568 aaKnown RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 ZNF341Q9BYN7 854 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 GLIS2Q9BZE0 524 aaPredicted RBP9.47□□□□□ -0.89
CHPT1-208ENST00000552215 ZHX3Q9H4I2 956 aa9.47□□□□□ -0.89
CHPT1-208ENST00000552215 CCDC196A0A1B0GTZ2 297 aa9.46□□□□□ -0.89
CHPT1-208ENST00000552215 KIF5BP33176 963 aa9.46□□□□□ -0.89
CHPT1-208ENST00000552215 NSMFQ6X4W1 530 aa9.46□□□□□ -0.89
CHPT1-208ENST00000552215 KLRF2D3W0D1 207 aa9.46□□□□□ -0.9
CHPT1-208ENST00000552215 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
CHPT1-208ENST00000552215 NOC3LQ8WTT2 800 aaKnown RBP9.46□□□□□ -0.9
CHPT1-208ENST00000552215 SPATA32Q96LK8 384 aa9.46□□□□□ -0.9
CHPT1-208ENST00000552215 RTFDC1Q9BY42 306 aaPredicted RBP9.46□□□□□ -0.9
CHPT1-208ENST00000552215 FTOQ9C0B1 505 aaKnown RBP eCLIP9.46□□□□□ -0.9
CHPT1-208ENST00000552215 WDR33Q9C0J8 1336 aaKnown RBP9.46□□□□□ -0.9
CHPT1-208ENST00000552215 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
CHPT1-208ENST00000552215 PPP1R12BO60237 982 aaPredicted RBP9.46□□□□□ -0.9
CHPT1-208ENST00000552215 TNFAIP1Q13829 316 aa9.46□□□□□ -0.9
CHPT1-208ENST00000552215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.9
CHPT1-208ENST00000552215 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
CHPT1-208ENST00000552215 CSADQ9Y600 493 aa9.46□□□□□ -0.9
CHPT1-208ENST00000552215 IL1R1P14778 569 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 KCNA3P22001 575 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 INPP5BP32019 993 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 L1TD1Q5T7N2 865 aaKnown RBP9.45□□□□□ -0.9
CHPT1-208ENST00000552215 TTBK2Q6IQ55 1244 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 APOBEC3HQ6NTF7 200 aaKnown RBP9.45□□□□□ -0.9
CHPT1-208ENST00000552215 APOA5Q6Q788 366 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 FANCBQ8NB91 859 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 NKX2-3Q8TAU0 364 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 COA7Q96BR5 231 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 SDF4Q9BRK5 362 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 ATP6V1DQ9Y5K8 247 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 AK9Q5TCS8 1911 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 TCRBV5S4A2TA0A5A2 114 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 CFBP00751 764 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 PTGER2P43116 358 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 TOB2Q14106 344 aaPredicted RBP9.45□□□□□ -0.9
CHPT1-208ENST00000552215 SLFN13Q68D06 897 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
CHPT1-208ENST00000552215 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 KDM3BQ7LBC6 1761 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
CHPT1-208ENST00000552215 CCDC194A0A1B0GVG4 234 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 FLOT1O75955 427 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 OSBPL5Q9H0X9 879 aaPredicted RBP9.45□□□□□ -0.9
CHPT1-208ENST00000552215 NWD2Q9ULI1 1742 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 EEF2P13639 858 aaKnown RBP9.45□□□□□ -0.9
CHPT1-208ENST00000552215 C12orf60Q5U649 245 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 ELP3Q9H9T3 547 aa9.45□□□□□ -0.9
CHPT1-208ENST00000552215 MED23Q9ULK4 1368 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 TRAF5O00463 557 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 ECE1P42892 770 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 GPR75-ASB3A0A0A6YYF3 556 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 ZNF174Q15697 407 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 ACER1Q8TDN7 264 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms