RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CCL14Q16627 93 aa18.94■□□□□ 0.62
CACNB3-220ENST00000551716 CCDC184Q52MB2 194 aa18.94■□□□□ 0.62
CACNB3-220ENST00000551716 DDX20Q9UHI6 824 aaKnown RBP18.94■□□□□ 0.62
CACNB3-220ENST00000551716 TMEM265A0A087WTH1 108 aa18.93■□□□□ 0.62
CACNB3-220ENST00000551716 USP17L10C9JJH3 530 aa18.93■□□□□ 0.62
CACNB3-220ENST00000551716 FOSL2P15408 326 aa18.93■□□□□ 0.62
CACNB3-220ENST00000551716 ATN1P54259 1190 aaPredicted RBP18.93■□□□□ 0.62
CACNB3-220ENST00000551716 Q3C1V9 767 aa18.93■□□□□ 0.62
CACNB3-220ENST00000551716 MRPL50Q8N5N7 158 aaKnown RBP18.93■□□□□ 0.62
CACNB3-220ENST00000551716 ARRDC4Q8NCT1 418 aa18.93■□□□□ 0.62
CACNB3-220ENST00000551716 MYH13Q9UKX3 1938 aa18.93■□□□□ 0.62
CACNB3-220ENST00000551716 SPTBN5Q9NRC6 3674 aaKnown RBP18.93■□□□□ 0.62
CACNB3-220ENST00000551716 LOC285556D6RIA3 1793 aa18.92■□□□□ 0.62
CACNB3-220ENST00000551716 COL9A1P20849 921 aa18.92■□□□□ 0.62
CACNB3-220ENST00000551716 RTP1P59025 263 aa18.92■□□□□ 0.62
CACNB3-220ENST00000551716 RRP1BQ14684 758 aaKnown RBP18.92■□□□□ 0.62
CACNB3-220ENST00000551716 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
CACNB3-220ENST00000551716 FOXP4Q8IVH2 680 aaPredicted RBP18.92■□□□□ 0.62
CACNB3-220ENST00000551716 MYLIPQ8WY64 445 aa18.92■□□□□ 0.62
CACNB3-220ENST00000551716 PORCNQ9H237 461 aa18.92■□□□□ 0.62
CACNB3-220ENST00000551716 AKAP2Q9Y2D5 859 aa18.92■□□□□ 0.62
CACNB3-220ENST00000551716 LAMA2P24043 3122 aaKnown RBP18.92■□□□□ 0.62
CACNB3-220ENST00000551716 MYH2Q9UKX2 1941 aa18.92■□□□□ 0.62
CACNB3-220ENST00000551716 SLC15A5A6NIM6 579 aa18.91■□□□□ 0.62
CACNB3-220ENST00000551716 CNGA1P29973 690 aa18.91■□□□□ 0.62
CACNB3-220ENST00000551716 ADORA1P30542 326 aa18.91■□□□□ 0.62
CACNB3-220ENST00000551716 ATP2B2Q01814 1243 aa18.91■□□□□ 0.62
CACNB3-220ENST00000551716 TJAP1Q5JTD0 557 aa18.91■□□□□ 0.62
CACNB3-220ENST00000551716 PAGR1Q9BTK6 254 aa18.91■□□□□ 0.62
CACNB3-220ENST00000551716 RABGAP1Q9Y3P9 1069 aa18.91■□□□□ 0.62
CACNB3-220ENST00000551716 TNFRSF10AO00220 468 aa18.9■□□□□ 0.62
CACNB3-220ENST00000551716 UBTFL1P0CB47 393 aaPredicted RBP18.9■□□□□ 0.62
CACNB3-220ENST00000551716 TEX11Q8IYF3 940 aa18.9■□□□□ 0.62
CACNB3-220ENST00000551716 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
CACNB3-220ENST00000551716 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
CACNB3-220ENST00000551716 ATP11BQ9Y2G3 1177 aa18.9■□□□□ 0.62
CACNB3-220ENST00000551716 PLXNB2O15031 1838 aa18.9■□□□□ 0.62
CACNB3-220ENST00000551716 PEX10O60683 326 aa18.89■□□□□ 0.61
CACNB3-220ENST00000551716 HOXC6P09630 235 aa18.89■□□□□ 0.61
CACNB3-220ENST00000551716 TIMM10P62072 90 aa18.89■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L2Q6R6M4 530 aa18.89■□□□□ 0.61
CACNB3-220ENST00000551716 NSUN4Q96CB9 384 aaKnown RBP18.89■□□□□ 0.61
CACNB3-220ENST00000551716 TTYH1Q9H313 450 aaPredicted RBP18.89■□□□□ 0.61
CACNB3-220ENST00000551716 COPRSQ9NQ92 184 aa18.89■□□□□ 0.61
CACNB3-220ENST00000551716 IVNS1ABPQ9Y6Y0 642 aa18.89■□□□□ 0.61
CACNB3-220ENST00000551716 BAG3O95817 575 aa18.88■□□□□ 0.61
CACNB3-220ENST00000551716 PLCG2P16885 1265 aa18.88■□□□□ 0.61
CACNB3-220ENST00000551716 PTPREP23469 700 aa18.88■□□□□ 0.61
CACNB3-220ENST00000551716 C9orf50Q5SZB4 431 aa18.88■□□□□ 0.61
CACNB3-220ENST00000551716 SLC39A5Q6ZMH5 540 aa18.88■□□□□ 0.61
CACNB3-220ENST00000551716 KBTBD13C9JR72 458 aa18.87■□□□□ 0.61
CACNB3-220ENST00000551716 METTL16Q86W50 562 aaKnown RBP18.87■□□□□ 0.61
CACNB3-220ENST00000551716 CRACR2BQ8N4Y2 399 aaPredicted RBP18.87■□□□□ 0.61
CACNB3-220ENST00000551716 ZNF384Q8TF68 577 aa18.87■□□□□ 0.61
CACNB3-220ENST00000551716 BADQ92934 168 aa18.87■□□□□ 0.61
CACNB3-220ENST00000551716 XAGE2Q96GT9 111 aa18.87■□□□□ 0.61
CACNB3-220ENST00000551716 MRS2Q9HD23 443 aa18.87■□□□□ 0.61
CACNB3-220ENST00000551716 PRDM5Q9NQX1 630 aaPredicted RBP18.87■□□□□ 0.61
CACNB3-220ENST00000551716 RAI14Q9P0K7 980 aa18.87■□□□□ 0.61
CACNB3-220ENST00000551716 A0A1B0GUL7 405 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 WDR78Q5VTH9 848 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 SPATA5Q8NB90 893 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 EMILIN3Q9NT22 766 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 FLRT1Q9NZU1 646 aa18.86■□□□□ 0.61
CACNB3-220ENST00000551716 GORABQ5T7V8 394 aa18.85■□□□□ 0.61
CACNB3-220ENST00000551716 C1orf53Q5VUE5 145 aa18.85■□□□□ 0.61
CACNB3-220ENST00000551716 HMG20BQ9P0W2 317 aa18.85■□□□□ 0.61
CACNB3-220ENST00000551716 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
CACNB3-220ENST00000551716 EYSQ5T1H1 3165 aa18.85■□□□□ 0.61
CACNB3-220ENST00000551716 DNAH12Q6ZR08 3092 aa18.84■□□□□ 0.61
CACNB3-220ENST00000551716 PRUNE2Q8WUY3 3088 aa18.84■□□□□ 0.61
CACNB3-220ENST00000551716 USP14P54578 494 aa18.84■□□□□ 0.61
CACNB3-220ENST00000551716 SNX17Q15036 470 aa18.84■□□□□ 0.61
CACNB3-220ENST00000551716 GJC2Q5T442 439 aaPredicted RBP18.84■□□□□ 0.61
CACNB3-220ENST00000551716 SH3RF3Q8TEJ3 882 aaPredicted RBP18.84■□□□□ 0.61
CACNB3-220ENST00000551716 LRP2BPQ9P2M1 347 aa18.84■□□□□ 0.61
CACNB3-220ENST00000551716 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
CACNB3-220ENST00000551716 TACC3Q9Y6A5 838 aa18.84■□□□□ 0.61
CACNB3-220ENST00000551716 STRNO43815 780 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 CYP2C19P33261 490 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 JAG1P78504 1218 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 GRB14Q14449 540 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 POTEEQ6S8J3 1075 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 LBX2Q6XYB7 198 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 SSH1Q8WYL5 1049 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 C12orf42Q96LP6 360 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.6
CACNB3-220ENST00000551716 PPP4CP60510 307 aa18.82■□□□□ 0.6
CACNB3-220ENST00000551716 TRIM60Q495X7 471 aa18.82■□□□□ 0.6
CACNB3-220ENST00000551716 OLFML2BQ68BL8 750 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms