RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 TRIM6-TRIM34B2RNG4 842 aa20.38■□□□□ 0.85
LETMD1-230ENST00000551477 GPAA1O43292 621 aa20.38■□□□□ 0.85
LETMD1-230ENST00000551477 CERKLQ49MI3 558 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-230ENST00000551477 GIMAP6Q6P9H5 292 aa20.38■□□□□ 0.85
LETMD1-230ENST00000551477 PLEKHM2Q8IWE5 1019 aa20.38■□□□□ 0.85
LETMD1-230ENST00000551477 R3HDMLQ9H3Y0 253 aa20.38■□□□□ 0.85
LETMD1-230ENST00000551477 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-230ENST00000551477 SWAP70Q9UH65 585 aa20.38■□□□□ 0.85
LETMD1-230ENST00000551477 PDHXO00330 501 aa20.37■□□□□ 0.85
LETMD1-230ENST00000551477 GDF11O95390 407 aa20.37■□□□□ 0.85
LETMD1-230ENST00000551477 SPP2Q13103 211 aa20.37■□□□□ 0.85
LETMD1-230ENST00000551477 GADL1Q6ZQY3 521 aa20.37■□□□□ 0.85
LETMD1-230ENST00000551477 CABP5Q9NP86 173 aa20.37■□□□□ 0.85
LETMD1-230ENST00000551477 ARPP21Q9UBL0 812 aaPredicted RBP20.37■□□□□ 0.85
LETMD1-230ENST00000551477 ZBTB21Q9ULJ3 1066 aa20.37■□□□□ 0.85
LETMD1-230ENST00000551477 USP17L12C9JPN9 530 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 USP17L21D6R901 530 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 M0R2C6 588 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 APPP05067 770 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 GABPAQ06546 454 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 ABCB5Q2M3G0 1257 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 ZMYM1Q5SVZ6 1142 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 C12orf60Q5U649 245 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 CCDC84Q86UT8 332 aaPredicted RBP20.36■□□□□ 0.85
LETMD1-230ENST00000551477 WDR18Q9BV38 432 aa20.36■□□□□ 0.85
LETMD1-230ENST00000551477 GH2P01242 217 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 CYP2D6P10635 497 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 SHMT1P34896 483 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 DGKZQ13574 1117 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 MOGSQ13724 837 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 CTU1Q7Z7A3 348 aaKnown RBP20.35■□□□□ 0.85
LETMD1-230ENST00000551477 PROCA1Q8NCQ7 364 aaPredicted RBP20.35■□□□□ 0.85
LETMD1-230ENST00000551477 RILPL2Q969X0 211 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 ERO1AQ96HE7 468 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 SLC45A1Q9Y2W3 748 aa20.35■□□□□ 0.85
LETMD1-230ENST00000551477 GSG1L2A8MUP6 293 aa20.34■□□□□ 0.85
LETMD1-230ENST00000551477 C19orf81C9J6K1 198 aa20.34■□□□□ 0.85
LETMD1-230ENST00000551477 PATL2C9JE40 543 aaKnown RBP20.34■□□□□ 0.85
LETMD1-230ENST00000551477 TLR2O60603 784 aa20.34■□□□□ 0.85
LETMD1-230ENST00000551477 SP3Q02447 781 aa20.34■□□□□ 0.85
LETMD1-230ENST00000551477 CTR9Q6PD62 1173 aa20.34■□□□□ 0.85
LETMD1-230ENST00000551477 PARK7Q99497 189 aaKnown RBP20.34■□□□□ 0.85
LETMD1-230ENST00000551477 TDO2P48775 406 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 BACE1P56817 501 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 JAG1P78504 1218 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 PABPC4Q13310 644 aaKnown RBP eCLIP20.33■□□□□ 0.85
LETMD1-230ENST00000551477 RAB3GAP1Q15042 981 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 ARHGEF6Q15052 776 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 SBK1Q52WX2 424 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 GPAT2Q6NUI2 795 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 SEC62Q99442 399 aaKnown RBP20.33■□□□□ 0.85
LETMD1-230ENST00000551477 HELLSQ9NRZ9 838 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 TMOD4Q9NZQ9 345 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 AGTPBP1Q9UPW5 1226 aa20.33■□□□□ 0.85
LETMD1-230ENST00000551477 LOC285556D6RIA3 1793 aa20.33■□□□□ 0.84
LETMD1-230ENST00000551477 CYP2D7A0A087X1C5 515 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 USP17L10C9JJH3 530 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 MPHOSPH10O00566 681 aaKnown RBP20.32■□□□□ 0.84
LETMD1-230ENST00000551477 HMGCS2P54868 508 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 MTMR2Q13614 643 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 PKN2Q16513 984 aaKnown RBP20.32■□□□□ 0.84
LETMD1-230ENST00000551477 SH3D19Q5HYK7 790 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 DYNLL2Q96FJ2 89 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 CCDC17Q96LX7 622 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 PNMA3Q9UL41 463 aa20.32■□□□□ 0.84
LETMD1-230ENST00000551477 CDK8P49336 464 aa20.31■□□□□ 0.84
LETMD1-230ENST00000551477 SHROOM1Q2M3G4 852 aaPredicted RBP20.31■□□□□ 0.84
LETMD1-230ENST00000551477 C16orf86Q6ZW13 317 aa20.31■□□□□ 0.84
LETMD1-230ENST00000551477 MCOLN1Q9GZU1 580 aa20.31■□□□□ 0.84
LETMD1-230ENST00000551477 MINDY4BA8MYZ0 360 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 EVX2Q03828 476 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 KIF22Q14807 665 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 MCMDC2Q4G0Z9 681 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 IFFO2Q5TF58 517 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 TMEM179Q6ZVK1 233 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 IFNL3Q8IZI9 196 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 SLC44A5Q8NCS7 719 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 FEZ1Q99689 392 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
LETMD1-230ENST00000551477 HIP1O00291 1037 aa20.29■□□□□ 0.84
LETMD1-230ENST00000551477 OSBPP22059 807 aa20.29■□□□□ 0.84
LETMD1-230ENST00000551477 USP14P54578 494 aa20.29■□□□□ 0.84
LETMD1-230ENST00000551477 USP17L2Q6R6M4 530 aa20.29■□□□□ 0.84
LETMD1-230ENST00000551477 SMCR8Q8TEV9 937 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-230ENST00000551477 NAPBQ9H115 298 aa20.29■□□□□ 0.84
LETMD1-230ENST00000551477 NEFLP07196 543 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 SLC3A2P08195 630 aaKnown RBP20.28■□□□□ 0.84
LETMD1-230ENST00000551477 CYP2C8P10632 490 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 PDE4AP27815 886 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 MFAP1P55081 439 aaKnown RBP20.28■□□□□ 0.84
LETMD1-230ENST00000551477 SEPT2Q15019 361 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 TREML2Q5T2D2 321 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 C17orf99Q6UX52 265 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 CD99L2Q8TCZ2 262 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 MKNK2Q9HBH9 465 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 EPB41L4AQ9HCS5 686 aaPredicted RBP20.28■□□□□ 0.84
LETMD1-230ENST00000551477 CPA4Q9UI42 421 aa20.28■□□□□ 0.84
LETMD1-230ENST00000551477 SDSP20132 328 aa20.27■□□□□ 0.84
LETMD1-230ENST00000551477 CCDC129Q6ZRS4 1044 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms