RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-215ENST00000551391 F13A1P00488 732 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 RING1Q06587 406 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 SEPT6Q14141 434 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 SNAP47Q5SQN1 464 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 SEZ6L2Q6UXD5 910 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 BNC2Q6ZN30 1099 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-215ENST00000551391 ZNF574Q6ZN55 896 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-215ENST00000551391 ARHGAP27Q6ZUM4 889 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 KIAA0825Q8IV33 1275 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 SPON2Q9BUD6 331 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 PPP1R9AQ9ULJ8 1098 aa5.69□□□□□ -1.5
SCAF11-215ENST00000551391 DYNC1LI2O43237 492 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-215ENST00000551391 FAM160A1Q05DH4 1040 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 BNIP3Q12983 259 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 MPP2Q14168 576 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 CYFIP1Q7L576 1253 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 HDXQ7Z353 690 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 SPRED2Q7Z698 418 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 ATG4DQ86TL0 474 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-215ENST00000551391 NETO1Q8TDF5 533 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 JARID2Q92833 1246 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-215ENST00000551391 SPATA32Q96LK8 384 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 ATXN3LQ9H3M9 355 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 DISC1Q9NRI5 854 aa5.68□□□□□ -1.5
SCAF11-215ENST00000551391 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 FANCGO15287 622 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 FAM87AP0C7U9 286 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 GJA8P48165 433 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 INPP5AQ14642 412 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 ZNF124Q15973 351 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 LRFN4Q6PJG9 635 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-215ENST00000551391 KSR1Q8IVT5 923 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 SLITRK4Q8IW52 837 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 RNF214Q8ND24 703 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 PI4K2BQ8TCG2 481 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 RASGRP4Q8TDF6 673 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 FAM168AQ92567 244 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 EAF1Q96JC9 268 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-215ENST00000551391 FANCD2OSQ96PS1 177 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 SLC38A3Q99624 504 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 CCSER2Q9H7U1 834 aa5.67□□□□□ -1.5
SCAF11-215ENST00000551391 RC3H2Q9HBD1 1191 aaKnown RBP5.67□□□□□ -1.5
SCAF11-215ENST00000551391 BPNT1O95861 308 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 FUT4P22083 530 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 PAK2Q13177 524 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 WIPI1Q5MNZ9 446 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-215ENST00000551391 ELMO3Q96BJ8 720 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 PLPPR2Q96GM1 343 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 C8orf37Q96NL8 207 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 ACBD3Q9H3P7 528 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 VAV3Q9UKW4 847 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 PRR36Q9H6K5 1346 aa5.66□□□□□ -1.5
SCAF11-215ENST00000551391 ARID1BQ8NFD5 2236 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-215ENST00000551391 DCDC2CA8MYV0 355 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 RNGTTO60942 597 aaKnown RBP5.65□□□□□ -1.5
SCAF11-215ENST00000551391 CD8BP10966 210 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 CRKP46108 304 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 ZC3H6P61129 1189 aaKnown RBP5.65□□□□□ -1.5
SCAF11-215ENST00000551391 PRKCQQ04759 706 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 APOBRQ0VD83 1088 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 CDK5R2Q13319 367 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 COL9A2Q14055 689 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-215ENST00000551391 CWF19L2Q2TBE0 894 aaKnown RBP5.65□□□□□ -1.5
SCAF11-215ENST00000551391 REC114Q7Z4M0 266 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 C12orf40Q86WS4 652 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.5
SCAF11-215ENST00000551391 PLD6Q8N2A8 252 aaKnown RBP5.65□□□□□ -1.5
SCAF11-215ENST00000551391 SLC43A3Q8NBI5 491 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 TMEM40Q8WWA1 233 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 GPRASP2Q96D09 838 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 WNT10AQ9GZT5 417 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 UBP1Q9NZI7 540 aa5.65□□□□□ -1.5
SCAF11-215ENST00000551391 CARMIL2Q6F5E8 1435 aa5.65□□□□□ -1.51
SCAF11-215ENST00000551391 ATE1O95260 518 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 RNASE1P07998 156 aaKnown RBP5.64□□□□□ -1.51
SCAF11-215ENST00000551391 NTF4P34130 210 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 CDK8P49336 464 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 GNL2Q13823 731 aaKnown RBP5.64□□□□□ -1.51
SCAF11-215ENST00000551391 IFI16Q16666 785 aaKnown RBP5.64□□□□□ -1.51
SCAF11-215ENST00000551391 AOC3Q16853 763 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 ZBTB37Q5TC79 503 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 SMYD4Q8IYR2 804 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-215ENST00000551391 FAM181AQ8N9Y4 354 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 KCT2Q8NC54 265 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 FBXO27Q8NI29 283 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 NKD1Q969G9 470 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 INPP5FQ9Y2H2 1132 aa5.64□□□□□ -1.51
SCAF11-215ENST00000551391 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-215ENST00000551391 ZNF165P49910 485 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 PDE4BQ07343 736 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 TTLL4Q14679 1199 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 PPM1JQ5JR12 505 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 ZNF507Q8TCN5 953 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 SEC16BQ96JE7 1060 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 HRASLS5Q96KN8 279 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 TINF2Q9BSI4 451 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 EHMT1Q9H9B1 1298 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 SSU72Q9NP77 194 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms