RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PI4K2BQ8TCG2 481 aa22.88■■□□□ 1.25
DDX54-208ENST00000551344 OTUD7AQ8TE49 926 aaPredicted RBP22.88■■□□□ 1.25
DDX54-208ENST00000551344 AGTPBP1Q9UPW5 1226 aa22.88■■□□□ 1.25
DDX54-208ENST00000551344 GDF11O95390 407 aa22.87■■□□□ 1.25
DDX54-208ENST00000551344 GABPAQ06546 454 aa22.87■■□□□ 1.25
DDX54-208ENST00000551344 CERKLQ49MI3 558 aaPredicted RBP22.87■■□□□ 1.25
DDX54-208ENST00000551344 PUS7LQ9H0K6 701 aaKnown RBP22.87■■□□□ 1.25
DDX54-208ENST00000551344 CPA4Q9UI42 421 aa22.87■■□□□ 1.25
DDX54-208ENST00000551344 ZBTB21Q9ULJ3 1066 aa22.87■■□□□ 1.25
DDX54-208ENST00000551344 PHIPQ8WWQ0 1821 aa22.87■■□□□ 1.25
DDX54-208ENST00000551344 ADGRA2Q96PE1 1338 aa22.86■■□□□ 1.25
DDX54-208ENST00000551344 C19orf81C9J6K1 198 aa22.86■■□□□ 1.25
DDX54-208ENST00000551344 RNF113AO15541 343 aaKnown RBP22.86■■□□□ 1.25
DDX54-208ENST00000551344 PRKAB2O43741 272 aa22.86■■□□□ 1.25
DDX54-208ENST00000551344 CYP2C8P10632 490 aa22.86■■□□□ 1.25
DDX54-208ENST00000551344 BACE1P56817 501 aa22.86■■□□□ 1.25
DDX54-208ENST00000551344 LACTBP83111 547 aaPredicted RBP22.86■■□□□ 1.25
DDX54-208ENST00000551344 DDRGK1Q96HY6 314 aa22.86■■□□□ 1.25
DDX54-208ENST00000551344 PTPN22Q9Y2R2 807 aa22.86■■□□□ 1.25
DDX54-208ENST00000551344 SALL3Q9BXA9 1300 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 GNRH1P01148 92 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 GH2P01242 217 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 HMGCS2P54868 508 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 CAP1Q01518 475 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 PABPC4Q13310 644 aaKnown RBP eCLIP22.85■■□□□ 1.25
DDX54-208ENST00000551344 SMC5Q8IY18 1101 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 APPBP2Q92624 585 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 CABP5Q9NP86 173 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 STAP2Q9UGK3 403 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 SLC4A4Q9Y6R1 1079 aa22.85■■□□□ 1.25
DDX54-208ENST00000551344 USP17L10C9JJH3 530 aa22.84■■□□□ 1.25
DDX54-208ENST00000551344 SHMT1P34896 483 aa22.84■■□□□ 1.25
DDX54-208ENST00000551344 ABCB5Q2M3G0 1257 aa22.84■■□□□ 1.25
DDX54-208ENST00000551344 AMOTL1Q8IY63 956 aa22.84■■□□□ 1.25
DDX54-208ENST00000551344 STRBPQ96SI9 672 aaKnown RBP22.84■■□□□ 1.25
DDX54-208ENST00000551344 SWAP70Q9UH65 585 aa22.84■■□□□ 1.25
DDX54-208ENST00000551344 PNMA3Q9UL41 463 aa22.84■■□□□ 1.25
DDX54-208ENST00000551344 BCRP11274 1271 aa22.83■■□□□ 1.25
DDX54-208ENST00000551344 SHROOM1Q2M3G4 852 aaPredicted RBP22.83■■□□□ 1.25
DDX54-208ENST00000551344 TREML2Q5T2D2 321 aa22.83■■□□□ 1.25
DDX54-208ENST00000551344 OSBP2Q969R2 916 aa22.83■■□□□ 1.25
DDX54-208ENST00000551344 TMOD4Q9NZQ9 345 aa22.83■■□□□ 1.25
DDX54-208ENST00000551344 ATAD5Q96QE3 1844 aa22.82■■□□□ 1.24
DDX54-208ENST00000551344 PTPRFP10586 1907 aa22.82■■□□□ 1.24
DDX54-208ENST00000551344 USP17L12C9JPN9 530 aa22.82■■□□□ 1.24
DDX54-208ENST00000551344 USP17L21D6R901 530 aa22.82■■□□□ 1.24
DDX54-208ENST00000551344 MTMR2Q13614 643 aa22.82■■□□□ 1.24
DDX54-208ENST00000551344 C12orf60Q5U649 245 aa22.82■■□□□ 1.24
DDX54-208ENST00000551344 SMCR8Q8TEV9 937 aaPredicted RBP22.82■■□□□ 1.24
DDX54-208ENST00000551344 MYH7P12883 1935 aa22.81■■□□□ 1.24
DDX54-208ENST00000551344 IGHDP01880 384 aa22.81■■□□□ 1.24
DDX54-208ENST00000551344 CYP2D6P10635 497 aa22.81■■□□□ 1.24
DDX54-208ENST00000551344 OSBPP22059 807 aa22.81■■□□□ 1.24
DDX54-208ENST00000551344 RGS19P49795 217 aa22.81■■□□□ 1.24
DDX54-208ENST00000551344 PDE1AP54750 535 aa22.81■■□□□ 1.24
DDX54-208ENST00000551344 GIMAP6Q6P9H5 292 aa22.81■■□□□ 1.24
DDX54-208ENST00000551344 GNAT2P19087 354 aa22.8■■□□□ 1.24
DDX54-208ENST00000551344 HOXD10P28358 340 aa22.8■■□□□ 1.24
DDX54-208ENST00000551344 HOXA7P31268 230 aaPredicted RBP22.8■■□□□ 1.24
DDX54-208ENST00000551344 PSMC4P43686 418 aa22.8■■□□□ 1.24
DDX54-208ENST00000551344 PRMT2P55345 433 aa22.8■■□□□ 1.24
DDX54-208ENST00000551344 RAB3GAP1Q15042 981 aa22.8■■□□□ 1.24
DDX54-208ENST00000551344 FSD1Q9BTV5 496 aa22.8■■□□□ 1.24
DDX54-208ENST00000551344 ARHGAP39Q9C0H5 1083 aa22.8■■□□□ 1.24
DDX54-208ENST00000551344 GCLCP48506 637 aaPredicted RBP22.79■■□□□ 1.24
DDX54-208ENST00000551344 EVX2Q03828 476 aa22.79■■□□□ 1.24
DDX54-208ENST00000551344 CTR9Q6PD62 1173 aa22.79■■□□□ 1.24
DDX54-208ENST00000551344 USP17L2Q6R6M4 530 aa22.79■■□□□ 1.24
DDX54-208ENST00000551344 LNPKQ9C0E8 428 aa22.79■■□□□ 1.24
DDX54-208ENST00000551344 DDX60LQ5H9U9 1706 aaKnown RBP22.79■■□□□ 1.24
DDX54-208ENST00000551344 GSG1L2A8MUP6 293 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 GPAA1O43292 621 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 FMNL1O95466 1100 aaPredicted RBP22.78■■□□□ 1.24
DDX54-208ENST00000551344 USP14P54578 494 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 SBK1Q52WX2 424 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 B4GALNT3Q6L9W6 998 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 NAV1Q8NEY1 1877 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 EVI5LQ96CN4 794 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 DYNLL2Q96FJ2 89 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 CCDC17Q96LX7 622 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 ASCC2Q9H1I8 757 aaPredicted RBP22.78■■□□□ 1.24
DDX54-208ENST00000551344 EMILIN3Q9NT22 766 aa22.78■■□□□ 1.24
DDX54-208ENST00000551344 ARPP21Q9UBL0 812 aaPredicted RBP22.78■■□□□ 1.24
DDX54-208ENST00000551344 CTGFP29279 349 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 GUCY1A2P33402 732 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 CDK8P49336 464 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 CHD1LQ86WJ1 897 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 TICAM2Q86XR7 235 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 TRIM47Q96LD4 638 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 C12orf42Q96LP6 360 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 KIAA1683Q9H0B3 1180 aa22.77■■□□□ 1.24
DDX54-208ENST00000551344 CYP2D7A0A087X1C5 515 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 PATL2C9JE40 543 aaKnown RBP22.76■■□□□ 1.23
DDX54-208ENST00000551344 MPHOSPH10O00566 681 aaKnown RBP22.76■■□□□ 1.23
DDX54-208ENST00000551344 FCGRTP55899 365 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 NUCB1Q02818 461 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 SEPT2Q15019 361 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 ZMYM1Q5SVZ6 1142 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 TMEM179Q6ZVK1 233 aa22.76■■□□□ 1.23
DDX54-208ENST00000551344 C16orf86Q6ZW13 317 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms