RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 TRIM34Q9BYJ4 488 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 MYOZ2Q9NPC6 264 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 DDX4Q9NQI0 724 aaKnown RBP16.63■□□□□ 0.25
LETMD1-229ENST00000551261 RBM28Q9NW13 759 aaKnown RBP16.63■□□□□ 0.25
LETMD1-229ENST00000551261 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
LETMD1-229ENST00000551261 TACC3Q9Y6A5 838 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
LETMD1-229ENST00000551261 MYH8P13535 1937 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 RASA1P20936 1047 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 STK3Q13188 491 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
LETMD1-229ENST00000551261 ZNF654Q8IZM8 581 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 FAM184AQ8NB25 1140 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
LETMD1-229ENST00000551261 FAM151AQ8WW52 585 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 NAP1L2Q9ULW6 460 aaPredicted RBP16.62■□□□□ 0.25
LETMD1-229ENST00000551261 HPS5Q9UPZ3 1129 aa16.62■□□□□ 0.25
LETMD1-229ENST00000551261 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 STX6O43752 255 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 PRDM1O75626 825 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 BRD1O95696 1058 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 TFAP4Q01664 338 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 NFIAQ12857 509 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 WASF1Q92558 559 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 PRMT6Q96LA8 375 aaPredicted RBP16.61■□□□□ 0.25
LETMD1-229ENST00000551261 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
LETMD1-229ENST00000551261 TDRD3Q9H7E2 651 aaKnown RBP16.61■□□□□ 0.25
LETMD1-229ENST00000551261 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
LETMD1-229ENST00000551261 ZNF70Q9UC06 446 aaPredicted RBP16.61■□□□□ 0.25
LETMD1-229ENST00000551261 FAM198AQ9UFP1 575 aa16.61■□□□□ 0.25
LETMD1-229ENST00000551261 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
LETMD1-229ENST00000551261 GOLGA6L22H0YM25 854 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 KIF5BP33176 963 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 NOVP48745 357 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 RTN1Q16799 776 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 MICU3Q86XE3 530 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 CRACR2BQ8N4Y2 399 aaPredicted RBP16.6■□□□□ 0.25
LETMD1-229ENST00000551261 KAT14Q9H8E8 782 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 SYNPO2Q9UMS6 1093 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 SBF1O95248 1867 aa16.6■□□□□ 0.25
LETMD1-229ENST00000551261 GREB1LQ9C091 1923 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-229ENST00000551261 DDX11L8A8MPP1 907 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 H7C1D1 291 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 IFNAR1P17181 557 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 SYT1P21579 422 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 GMPSP49915 693 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-229ENST00000551261 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-229ENST00000551261 TRIM22Q8IYM9 498 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 CTCFLQ8NI51 663 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-229ENST00000551261 HOOK2Q96ED9 719 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 DYNLL2Q96FJ2 89 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 SIPA1L1O43166 1804 aa16.59■□□□□ 0.25
LETMD1-229ENST00000551261 WNT10BO00744 389 aa16.58■□□□□ 0.24
LETMD1-229ENST00000551261 GRIN3BO60391 1043 aa16.58■□□□□ 0.24
LETMD1-229ENST00000551261 ZSCAN22P10073 491 aaPredicted RBP16.58■□□□□ 0.24
LETMD1-229ENST00000551261 GNAQP50148 359 aa16.58■□□□□ 0.24
LETMD1-229ENST00000551261 CCT2P78371 535 aaKnown RBP16.58■□□□□ 0.24
LETMD1-229ENST00000551261 LARP1BQ659C4 914 aaKnown RBP16.58■□□□□ 0.24
LETMD1-229ENST00000551261 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.24
LETMD1-229ENST00000551261 MICALL2Q8IY33 904 aa16.58■□□□□ 0.24
LETMD1-229ENST00000551261 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.24
LETMD1-229ENST00000551261 TNPO1Q92973 898 aaKnown RBP16.58■□□□□ 0.24
LETMD1-229ENST00000551261 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
LETMD1-229ENST00000551261 GPHNQ9NQX3 736 aaPredicted RBP16.58■□□□□ 0.24
LETMD1-229ENST00000551261 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 TBC1D12O60347 775 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
LETMD1-229ENST00000551261 TROAPQ12815 778 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 FAM177A1Q8N128 213 aaPredicted RBP16.57■□□□□ 0.24
LETMD1-229ENST00000551261 FANCBQ8NB91 859 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 LZTS2Q9BRK4 669 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 PPP2R3BQ9Y5P8 575 aa16.57■□□□□ 0.24
LETMD1-229ENST00000551261 SMIM22K7EJ46 135 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 CTDNEP1O95476 244 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 SHMT1P34896 483 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 PRELPP51888 382 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 APOBEC3FQ8IUX4 373 aaKnown RBP16.56■□□□□ 0.24
LETMD1-229ENST00000551261 SLC44A5Q8NCS7 719 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 PNMA1Q8ND90 353 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 RNF26Q9BY78 433 aaPredicted RBP16.56■□□□□ 0.24
LETMD1-229ENST00000551261 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
LETMD1-229ENST00000551261 GINM1Q9NU53 330 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 GPRC5DQ9NZD1 345 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 CNOT7Q9UIV1 285 aaKnown RBP16.56■□□□□ 0.24
LETMD1-229ENST00000551261 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
LETMD1-229ENST00000551261 IGKV6D-41A0A0C4DH26 115 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
LETMD1-229ENST00000551261 H3BQV1 296 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 FMNL1O95466 1100 aaPredicted RBP16.55■□□□□ 0.24
LETMD1-229ENST00000551261 TTLL1O95922 423 aa16.55■□□□□ 0.24
LETMD1-229ENST00000551261 EVX2Q03828 476 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms