RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PIDD1Q9HB75 910 aa7.43□□□□□ -1.22
LIMA1-205ENST00000550592 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.42□□□□□ -1.22
LIMA1-205ENST00000550592 A0A1W2PQH9 124 aa7.42□□□□□ -1.22
LIMA1-205ENST00000550592 UPK3BL1B0FP48 263 aa7.42□□□□□ -1.22
LIMA1-205ENST00000550592 UPK3BL2E5RIL1 263 aa7.42□□□□□ -1.22
LIMA1-205ENST00000550592 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
LIMA1-205ENST00000550592 YARSP54577 528 aaKnown RBP7.42□□□□□ -1.22
LIMA1-205ENST00000550592 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
LIMA1-205ENST00000550592 ARSHQ5FYA8 562 aa7.42□□□□□ -1.22
LIMA1-205ENST00000550592 TTC6Q86TZ1 520 aa7.42□□□□□ -1.22
LIMA1-205ENST00000550592 SMYD4Q8IYR2 804 aaPredicted RBP7.42□□□□□ -1.22
LIMA1-205ENST00000550592 FAM46AQ96IP4 442 aaKnown RBP7.42□□□□□ -1.22
LIMA1-205ENST00000550592 UBL7Q96S82 380 aaPredicted RBP7.42□□□□□ -1.22
LIMA1-205ENST00000550592 ACSS3Q9H6R3 686 aa7.42□□□□□ -1.22
LIMA1-205ENST00000550592 KLHL3Q9UH77 587 aa7.42□□□□□ -1.22
LIMA1-205ENST00000550592 U2SURPO15042 1029 aaKnown RBP7.41□□□□□ -1.22
LIMA1-205ENST00000550592 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
LIMA1-205ENST00000550592 ACRP10323 421 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 GLB1P16278 677 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 MBTPS1Q14703 1052 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 NFE2L2Q16236 605 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 NKG7Q16617 165 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 LRP10Q7Z4F1 713 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
LIMA1-205ENST00000550592 CELF2-AS1Q8N7Q2 184 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 FAM13CQ8NE31 585 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 SLC9A7Q96T83 725 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 PIF1Q9H611 641 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 PCOLCE2Q9UKZ9 415 aa7.41□□□□□ -1.22
LIMA1-205ENST00000550592 K7ELQ4 463 aaPredicted RBP7.4□□□□□ -1.22
LIMA1-205ENST00000550592 RNGTTO60942 597 aaKnown RBP7.4□□□□□ -1.22
LIMA1-205ENST00000550592 CST3P01034 146 aaPredicted RBP7.4□□□□□ -1.22
LIMA1-205ENST00000550592 CCNFP41002 786 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 USP11P51784 963 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 PPP2R5EQ16537 467 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 FXNQ16595 210 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 UVSSAQ2YD98 709 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 CDPF1Q6NVV7 123 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 GIMAP6Q6P9H5 292 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 UNC5AQ6ZN44 842 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.4□□□□□ -1.22
LIMA1-205ENST00000550592 UBE3DQ7Z6J8 389 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 CDK11AQ9UQ88 783 aaPredicted RBP7.4□□□□□ -1.22
LIMA1-205ENST00000550592 MSRB2Q9Y3D2 182 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 SLC12A7Q9Y666 1083 aa7.4□□□□□ -1.22
LIMA1-205ENST00000550592 RAG1P15918 1043 aa7.39□□□□□ -1.23
LIMA1-205ENST00000550592 DDR2Q16832 855 aa7.39□□□□□ -1.23
LIMA1-205ENST00000550592 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.39□□□□□ -1.23
LIMA1-205ENST00000550592 EZH1Q92800 747 aaPredicted RBP7.39□□□□□ -1.23
LIMA1-205ENST00000550592 CCDC113Q9H0I3 377 aa7.39□□□□□ -1.23
LIMA1-205ENST00000550592 SSU72Q9NP77 194 aaKnown RBP7.39□□□□□ -1.23
LIMA1-205ENST00000550592 LTBP3Q9NS15 1303 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 FAM181BA6NEQ2 426 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 RGS13O14921 159 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 GAS2O43903 313 aaKnown RBP7.38□□□□□ -1.23
LIMA1-205ENST00000550592 LRIG2O94898 1065 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 BMS1Q14692 1282 aaKnown RBP7.38□□□□□ -1.23
LIMA1-205ENST00000550592 ZYXQ15942 572 aaKnown RBP7.38□□□□□ -1.23
LIMA1-205ENST00000550592 TXNRD3Q86VQ6 643 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 CCDC74BQ96LY2 380 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 FOXQ1Q9C009 403 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 SEMA6CQ9H3T2 930 aa7.38□□□□□ -1.23
LIMA1-205ENST00000550592 RASA3Q14644 834 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 PRAMEF13Q5VWM6 474 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
LIMA1-205ENST00000550592 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
LIMA1-205ENST00000550592 ARMC10Q8N2F6 343 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 MFSD2AQ8NA29 543 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 MICAL1Q8TDZ2 1067 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 CYB5D2Q8WUJ1 264 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 FBLIM1Q8WUP2 373 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 MRFAP1L1Q96HT8 127 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 MEGF10Q96KG7 1140 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 MYRFLQ96LU7 910 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 KIF2CQ99661 725 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 YIPF2Q9BWQ6 316 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 PHAXQ9H814 394 aaKnown RBP7.37□□□□□ -1.23
LIMA1-205ENST00000550592 ST7Q9NRC1 585 aa7.37□□□□□ -1.23
LIMA1-205ENST00000550592 CADPSQ9ULU8 1353 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 KRBA1A5PL33 1030 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 NFICP08651 508 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 RAB6AP20340 208 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 POLR2BP30876 1174 aaKnown RBP7.36□□□□□ -1.23
LIMA1-205ENST00000550592 SGO2Q562F6 1265 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 SEZ6L2Q6UXD5 910 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 ARMCX6Q7L4S7 300 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 PHACTR4Q8IZ21 702 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 DHRS1Q96LJ7 313 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 PSMG3-AS1Q96PY0 264 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 DEPDC7Q96QD5 511 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 SRPK1Q96SB4 655 aaKnown RBP7.36□□□□□ -1.23
LIMA1-205ENST00000550592 DPH2Q9BQC3 489 aaPredicted RBP7.36□□□□□ -1.23
LIMA1-205ENST00000550592 SNTG2Q9NY99 539 aa7.36□□□□□ -1.23
LIMA1-205ENST00000550592 TLDC2A0PJX2 215 aa7.35□□□□□ -1.23
LIMA1-205ENST00000550592 FAM221BA6H8Z2 402 aa7.35□□□□□ -1.23
LIMA1-205ENST00000550592 SMARCA5O60264 1052 aaPredicted RBP7.35□□□□□ -1.23
LIMA1-205ENST00000550592 UBOX5O94941 541 aa7.35□□□□□ -1.23
LIMA1-205ENST00000550592 GJB6O95452 261 aa7.35□□□□□ -1.23
LIMA1-205ENST00000550592 BMP3P12645 472 aa7.35□□□□□ -1.23
LIMA1-205ENST00000550592 MAP7Q14244 749 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms