RNA–Protein interactions for RNA: ENST00000550582.2

NR4A1-216, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-216ENST00000550582 CCND3P30281 292 aaPredicted RBP17.77■□□□□ 0.44
NR4A1-216ENST00000550582 CCL14Q16627 93 aa17.77■□□□□ 0.44
NR4A1-216ENST00000550582 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
NR4A1-216ENST00000550582 SOCS4Q8WXH5 440 aa17.77■□□□□ 0.44
NR4A1-216ENST00000550582 DNAJC18Q9H819 358 aa17.77■□□□□ 0.44
NR4A1-216ENST00000550582 AATFQ9NY61 560 aaKnown RBP eCLIP17.77■□□□□ 0.44
NR4A1-216ENST00000550582 SIPA1L1O43166 1804 aa17.77■□□□□ 0.43
NR4A1-216ENST00000550582 ASNSP08243 561 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 COL6A1P12109 1028 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 ZKSCAN1P17029 563 aaPredicted RBP17.76■□□□□ 0.43
NR4A1-216ENST00000550582 MTX1Q13505 466 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 LHX8Q68G74 356 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 MAPKAPK5Q8IW41 473 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 TGFBRAP1Q8WUH2 860 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 USP6NLQ92738 828 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 NOL10Q9BSC4 688 aaKnown RBP17.76■□□□□ 0.43
NR4A1-216ENST00000550582 PAGR1Q9BTK6 254 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 PORCNQ9H237 461 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
NR4A1-216ENST00000550582 SNRKQ9NRH2 765 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 UNC80Q8N2C7 3258 aa17.76■□□□□ 0.43
NR4A1-216ENST00000550582 C19orf81C9J6K1 198 aa17.75■□□□□ 0.43
NR4A1-216ENST00000550582 USP17L10C9JJH3 530 aa17.75■□□□□ 0.43
NR4A1-216ENST00000550582 GNAI3P08754 354 aa17.75■□□□□ 0.43
NR4A1-216ENST00000550582 MAPK4P31152 587 aa17.75■□□□□ 0.43
NR4A1-216ENST00000550582 MDM2Q00987 491 aaPredicted RBP17.75■□□□□ 0.43
NR4A1-216ENST00000550582 LRRC26Q2I0M4 334 aa17.75■□□□□ 0.43
NR4A1-216ENST00000550582 POTEEQ6S8J3 1075 aa17.75■□□□□ 0.43
NR4A1-216ENST00000550582 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
NR4A1-216ENST00000550582 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
NR4A1-216ENST00000550582 BAG3O95817 575 aa17.74■□□□□ 0.43
NR4A1-216ENST00000550582 ERVK-9P63128 1117 aa17.74■□□□□ 0.43
NR4A1-216ENST00000550582 ERVK-24P63145 666 aa17.74■□□□□ 0.43
NR4A1-216ENST00000550582 MORN1Q5T089 497 aa17.74■□□□□ 0.43
NR4A1-216ENST00000550582 NAA16Q6N069 864 aaPredicted RBP17.74■□□□□ 0.43
NR4A1-216ENST00000550582 GPR142Q7Z601 462 aa17.74■□□□□ 0.43
NR4A1-216ENST00000550582 ADGRA1Q86SQ6 560 aa17.74■□□□□ 0.43
NR4A1-216ENST00000550582 TRMT44Q8IYL2 757 aaKnown RBP17.74■□□□□ 0.43
NR4A1-216ENST00000550582 PALD1Q9ULE6 856 aa17.74■□□□□ 0.43
NR4A1-216ENST00000550582 FLT1P17948 1338 aa17.73■□□□□ 0.43
NR4A1-216ENST00000550582 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
NR4A1-216ENST00000550582 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
NR4A1-216ENST00000550582 RGS2P41220 211 aa17.73■□□□□ 0.43
NR4A1-216ENST00000550582 PLEKHH3Q7Z736 793 aa17.73■□□□□ 0.43
NR4A1-216ENST00000550582 METTL16Q86W50 562 aaKnown RBP17.73■□□□□ 0.43
NR4A1-216ENST00000550582 FOXP4Q8IVH2 680 aaPredicted RBP17.73■□□□□ 0.43
NR4A1-216ENST00000550582 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
NR4A1-216ENST00000550582 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
NR4A1-216ENST00000550582 SAP30BPQ9UHR5 308 aaKnown RBP17.73■□□□□ 0.43
NR4A1-216ENST00000550582 ZBTB21Q9ULJ3 1066 aa17.73■□□□□ 0.43
NR4A1-216ENST00000550582 PNMA6EA0A0J9YXQ4 647 aa17.72■□□□□ 0.43
NR4A1-216ENST00000550582 PPP4CP60510 307 aa17.72■□□□□ 0.43
NR4A1-216ENST00000550582 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.43
NR4A1-216ENST00000550582 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
NR4A1-216ENST00000550582 PLCG2P16885 1265 aa17.71■□□□□ 0.43
NR4A1-216ENST00000550582 RARSP54136 660 aaKnown RBP17.71■□□□□ 0.43
NR4A1-216ENST00000550582 APBA2Q99767 749 aa17.71■□□□□ 0.43
NR4A1-216ENST00000550582 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
NR4A1-216ENST00000550582 DNAH12Q6ZR08 3092 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 CNMDO75829 334 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
NR4A1-216ENST00000550582 ZYXQ15942 572 aaKnown RBP17.7■□□□□ 0.42
NR4A1-216ENST00000550582 TTC39AQ5SRH9 613 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L2Q6R6M4 530 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 EDC3Q96F86 508 aaKnown RBP17.7■□□□□ 0.42
NR4A1-216ENST00000550582 SENP6Q9GZR1 1112 aaPredicted RBP17.7■□□□□ 0.42
NR4A1-216ENST00000550582 GINM1Q9NU53 330 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 FLRT1Q9NZU1 646 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
NR4A1-216ENST00000550582 LAMA2P24043 3122 aaKnown RBP17.69■□□□□ 0.42
NR4A1-216ENST00000550582 GH2P01242 217 aa17.69■□□□□ 0.42
NR4A1-216ENST00000550582 GNAI2P04899 355 aa17.69■□□□□ 0.42
NR4A1-216ENST00000550582 DYNLL1P63167 89 aaKnown RBP17.69■□□□□ 0.42
NR4A1-216ENST00000550582 MAP2K5Q13163 448 aa17.69■□□□□ 0.42
NR4A1-216ENST00000550582 GTF3C2Q8WUA4 911 aaPredicted RBP17.69■□□□□ 0.42
NR4A1-216ENST00000550582 FAM161BQ96MY7 647 aa17.69■□□□□ 0.42
NR4A1-216ENST00000550582 DBNDD2Q9BQY9 259 aa17.69■□□□□ 0.42
NR4A1-216ENST00000550582 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
NR4A1-216ENST00000550582 CDK5RAP2Q96SN8 1893 aa17.69■□□□□ 0.42
NR4A1-216ENST00000550582 POTEB2H3BUK9 544 aa17.68■□□□□ 0.42
NR4A1-216ENST00000550582 HLA-DOAP06340 250 aa17.68■□□□□ 0.42
NR4A1-216ENST00000550582 WDR78Q5VTH9 848 aa17.68■□□□□ 0.42
NR4A1-216ENST00000550582 GUCD1Q96NT3 240 aa17.68■□□□□ 0.42
NR4A1-216ENST00000550582 RABGAP1Q9Y3P9 1069 aa17.68■□□□□ 0.42
NR4A1-216ENST00000550582 MAST2Q6P0Q8 1798 aa17.68■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L15C9J2P7 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L13C9JLJ4 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L11C9JVI0 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L18D6R9N7 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L22D6RA61 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L17D6RBQ6 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L19D6RCP7 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L20D6RJB6 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 ATN1P54259 1190 aaPredicted RBP17.67■□□□□ 0.42
NR4A1-216ENST00000550582 USP17L24Q0WX57 530 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 TNNI3KQ59H18 835 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 CCDC158Q5M9N0 1113 aa17.67■□□□□ 0.42
NR4A1-216ENST00000550582 MFSD14CQ5VZR4 134 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms