RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CCDC192P0DO97 292 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 ATP2B1P20020 1258 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 ATL3Q6DD88 541 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 TEX11Q8IYF3 940 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 CERS5Q8N5B7 392 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 VPS54Q9P1Q0 977 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 MRVI1Q9Y6F6 885 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 CCDC196A0A1B0GTZ2 297 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 WDHD1O75717 1129 aaPredicted RBP24.27■■□□□ 1.48
PRDM4-205ENST00000550376 LDHCP07864 332 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 VEGFAP15692 232 aaPredicted RBP24.27■■□□□ 1.48
PRDM4-205ENST00000550376 NDUFA8P51970 172 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 PPP4CP60510 307 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 DIS3L2Q8IYB7 885 aaKnown RBP24.27■■□□□ 1.48
PRDM4-205ENST00000550376 POLR3EQ9NVU0 708 aa24.27■■□□□ 1.48
PRDM4-205ENST00000550376 PDE6BP35913 854 aa24.26■■□□□ 1.47
PRDM4-205ENST00000550376 SCNN1DP51172 638 aa24.26■■□□□ 1.47
PRDM4-205ENST00000550376 RCSD1Q6JBY9 416 aa24.26■■□□□ 1.47
PRDM4-205ENST00000550376 MTA3Q9BTC8 594 aa24.26■■□□□ 1.47
PRDM4-205ENST00000550376 CCDC73Q6ZRK6 1079 aa24.26■■□□□ 1.47
PRDM4-205ENST00000550376 DBNDD1Q9H9R9 158 aa24.26■■□□□ 1.47
PRDM4-205ENST00000550376 C2CD5Q86YS7 1000 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 ENGASEQ8NFI3 743 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 MYH15Q9Y2K3 1946 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 GPR75-ASB3A0A0A6YYF3 556 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 DEXIO95424 95 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 MMP1P03956 469 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 U2AF2P26368 475 aaKnown RBP eCLIP24.25■■□□□ 1.47
PRDM4-205ENST00000550376 FUT2Q10981 343 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 PICALMQ13492 652 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 PKN1Q16512 942 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 STK36Q9NRP7 1315 aa24.25■■□□□ 1.47
PRDM4-205ENST00000550376 AP5Z1O43299 807 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 RHBDL3P58872 404 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 ANO6Q4KMQ2 910 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 ADALQ6DHV7 355 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 SRBD1Q8N5C6 995 aaKnown RBP24.24■■□□□ 1.47
PRDM4-205ENST00000550376 MASTLQ96GX5 879 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 PDLIM2Q96JY6 352 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 CLIC6Q96NY7 704 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 FAM205CA6NFA0 338 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 ALDH1B1P30837 517 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 RASGRP2Q7LDG7 609 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 LUZP1Q86V48 1076 aa24.24■■□□□ 1.47
PRDM4-205ENST00000550376 NID2Q14112 1375 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 FLAD1Q8NFF5 587 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 G3V3G9 751 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 PCP11498 1178 aaKnown RBP24.23■■□□□ 1.47
PRDM4-205ENST00000550376 AKAP17AQ02040 695 aaKnown RBP24.23■■□□□ 1.47
PRDM4-205ENST00000550376 FAM160A1Q05DH4 1040 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 DCAF8Q5TAQ9 597 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 NOSTRINQ8IVI9 506 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 FAM43AQ8N2R8 423 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 KCNG4Q8TDN1 519 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 MRPS27Q92552 414 aaKnown RBP24.23■■□□□ 1.47
PRDM4-205ENST00000550376 WASF1Q92558 559 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 DAGLAQ9Y4D2 1042 aa24.23■■□□□ 1.47
PRDM4-205ENST00000550376 YEATS4O95619 227 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 TOB1P50616 345 aaPredicted RBP24.22■■□□□ 1.47
PRDM4-205ENST00000550376 SPECC1Q5M775 1068 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 AXDND1Q5T1B0 1012 aaPredicted RBP24.22■■□□□ 1.47
PRDM4-205ENST00000550376 MAP3K14Q99558 947 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 DNAJC25Q9H1X3 360 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 FLT1P17948 1338 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 SLURP2P0DP57 97 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 SLC39A14Q15043 492 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 NOM1Q5C9Z4 860 aaKnown RBP24.22■■□□□ 1.47
PRDM4-205ENST00000550376 COA1Q9GZY4 146 aa24.22■■□□□ 1.47
PRDM4-205ENST00000550376 TTF2Q9UNY4 1162 aaKnown RBP24.22■■□□□ 1.47
PRDM4-205ENST00000550376 KINO60870 393 aaKnown RBP24.21■■□□□ 1.47
PRDM4-205ENST00000550376 TSPY3P0CV98 308 aa24.21■■□□□ 1.47
PRDM4-205ENST00000550376 TSPY8P0CW00 308 aa24.21■■□□□ 1.47
PRDM4-205ENST00000550376 FMR1NBQ8N0W7 255 aaPredicted RBP24.21■■□□□ 1.47
PRDM4-205ENST00000550376 ZNF444Q8N0Y2 327 aaPredicted RBP24.21■■□□□ 1.47
PRDM4-205ENST00000550376 STX8Q9UNK0 236 aa24.21■■□□□ 1.47
PRDM4-205ENST00000550376 ECM29Q5VYK3 1845 aa24.21■■□□□ 1.47
PRDM4-205ENST00000550376 EARS2Q5JPH6 523 aaKnown RBP24.21■■□□□ 1.47
PRDM4-205ENST00000550376 SASS6Q6UVJ0 657 aa24.21■■□□□ 1.47
PRDM4-205ENST00000550376 STAG2Q8N3U4 1231 aa24.21■■□□□ 1.47
PRDM4-205ENST00000550376 PCDHAC2Q9Y5I4 1007 aa24.21■■□□□ 1.47
PRDM4-205ENST00000550376 ESPNB1AK53 854 aa24.2■■□□□ 1.47
PRDM4-205ENST00000550376 PTPAQ15257 358 aa24.2■■□□□ 1.47
PRDM4-205ENST00000550376 SAFBQ15424 915 aaKnown RBP eCLIP24.2■■□□□ 1.47
PRDM4-205ENST00000550376 SLC15A2Q16348 729 aa24.2■■□□□ 1.47
PRDM4-205ENST00000550376 RBM43Q6ZSC3 357 aaKnown RBP24.2■■□□□ 1.47
PRDM4-205ENST00000550376 TMTC3Q6ZXV5 915 aa24.2■■□□□ 1.47
PRDM4-205ENST00000550376 CTCFLQ8NI51 663 aaPredicted RBP24.2■■□□□ 1.47
PRDM4-205ENST00000550376 TBC1D22AQ8WUA7 517 aa24.2■■□□□ 1.47
PRDM4-205ENST00000550376 CABP5Q9NP86 173 aa24.2■■□□□ 1.47
PRDM4-205ENST00000550376 KIAA1551Q9HCM1 1747 aa24.2■■□□□ 1.46
PRDM4-205ENST00000550376 ADAMTS3O15072 1205 aa24.2■■□□□ 1.46
PRDM4-205ENST00000550376 ZBTB22O15209 634 aa24.2■■□□□ 1.46
PRDM4-205ENST00000550376 TMC4Q7Z404 712 aa24.2■■□□□ 1.46
PRDM4-205ENST00000550376 AMOTL1Q8IY63 956 aa24.2■■□□□ 1.46
PRDM4-205ENST00000550376 RNF26Q9BY78 433 aaPredicted RBP24.2■■□□□ 1.46
PRDM4-205ENST00000550376 FAM205AQ6ZU69 1335 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 ADCY5O95622 1261 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 SDF4Q9BRK5 362 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 KAT14Q9H8E8 782 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 MAST2Q6P0Q8 1798 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms