RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 CDHR2Q9BYE9 1310 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
VDR-208ENST00000550325 SH3TC1Q8TE82 1336 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 MACROD2A1Z1Q3 448 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 DNA2P51530 1060 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 PDCLQ13371 301 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 ANKLE2Q86XL3 938 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 ZNF185O15231 689 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 ATP2C2O75185 946 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 CDKL5O76039 1030 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 ATP1A1P05023 1023 aaKnown RBP13.68□□□□□ -0.22
VDR-208ENST00000550325 PLCD1P51178 756 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 PTPAQ15257 358 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 COG1Q8WTW3 980 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 CHP1Q99653 195 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 NAA15Q9BXJ9 866 aaKnown RBP13.68□□□□□ -0.22
VDR-208ENST00000550325 SAR1BQ9Y6B6 198 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 USP31Q70CQ4 1352 aa13.68□□□□□ -0.22
VDR-208ENST00000550325 CLGNO14967 610 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
VDR-208ENST00000550325 MYO1BO43795 1136 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 ZNF18P17022 549 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 USP14P54578 494 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 RASGRP2Q7LDG7 609 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 AIDAQ96BJ3 306 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 CEP89Q96ST8 783 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 SENP2Q9HC62 589 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 CD248Q9HCU0 757 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 SEC31BQ9NQW1 1179 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 B4E1Z4 1266 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 MYBL2P10244 700 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 PSEN1P49768 467 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 ERVK-24P63145 666 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
VDR-208ENST00000550325 SETD1AO15047 1707 aaKnown RBP13.67□□□□□ -0.22
VDR-208ENST00000550325 A0A1B0GTH6 734 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 IPO7O95373 1038 aaKnown RBP13.67□□□□□ -0.22
VDR-208ENST00000550325 GYPCP04921 128 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 TUBB2AQ13885 445 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 CYP26C1Q6V0L0 522 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 TMTC1Q8IUR5 882 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 EEF2KMTQ96G04 330 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 TUBB2BQ9BVA1 445 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 INCENPQ9NQS7 918 aa13.67□□□□□ -0.22
VDR-208ENST00000550325 TUBBP07437 444 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 MCM3P25205 808 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 TUBB4BP68371 445 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 SLC7A5Q01650 507 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 BLZF1Q9H2G9 400 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 JCADQ9P266 1359 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 ZBTB43O43298 467 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 DIS3L2Q8IYB7 885 aaKnown RBP13.66□□□□□ -0.22
VDR-208ENST00000550325 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 ANTXR2P58335 489 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 UBXN1Q04323 297 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 LRRC24Q50LG9 513 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 RRAGBQ5VZM2 374 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 JAKMIP2Q96AA8 810 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 MED15Q96RN5 788 aa13.66□□□□□ -0.22
VDR-208ENST00000550325 ACTN3Q08043 901 aaPredicted RBP13.65□□□□□ -0.22
VDR-208ENST00000550325 SSRP1Q08945 709 aaKnown RBP13.65□□□□□ -0.22
VDR-208ENST00000550325 NR5A1Q13285 461 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 SH2D3CQ8N5H7 860 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 RRP36Q96EU6 259 aaKnown RBP13.65□□□□□ -0.22
VDR-208ENST00000550325 PCDHB6Q9Y5E3 794 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 PRPF6O94906 941 aaKnown RBP13.65□□□□□ -0.22
VDR-208ENST00000550325 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
VDR-208ENST00000550325 SCP2P22307 547 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 PPFIA1Q13136 1202 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 SPATA1Q5VX52 437 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 A2ML1A8K2U0 1454 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 IDEP14735 1019 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 MORC3Q14149 939 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 TMEM67Q5HYA8 995 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
VDR-208ENST00000550325 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
VDR-208ENST00000550325 ANGEL1Q9UNK9 670 aaKnown RBP13.65□□□□□ -0.22
VDR-208ENST00000550325 NEO1Q92859 1461 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
VDR-208ENST00000550325 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
VDR-208ENST00000550325 NF2P35240 595 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 CDR1P51861 262 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 CABS1Q96KC9 395 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 ABHD10Q9NUJ1 306 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 EPN1Q9Y6I3 576 aaPredicted RBP13.64□□□□□ -0.23
VDR-208ENST00000550325 PPARAQ07869 468 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 PPP2R5AQ15172 486 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms