RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TAF1CQ15572 869 aaPredicted RBP31.08■■■□□ 2.57
CPSF6-205ENST00000550075 CERKLQ49MI3 558 aaPredicted RBP31.08■■■□□ 2.57
CPSF6-205ENST00000550075 COL13A1Q5TAT6 717 aaPredicted RBP31.08■■■□□ 2.57
CPSF6-205ENST00000550075 FASTKD5Q7L8L6 764 aaKnown RBP31.08■■■□□ 2.57
CPSF6-205ENST00000550075 PRRT2Q7Z6L0 340 aaPredicted RBP31.08■■■□□ 2.57
CPSF6-205ENST00000550075 ZNF280CQ8ND82 737 aa31.08■■■□□ 2.57
CPSF6-205ENST00000550075 NACAP1Q9BZK3 213 aa31.08■■■□□ 2.57
CPSF6-205ENST00000550075 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.08■■■□□ 2.57
CPSF6-205ENST00000550075 CASP8AP2Q9UKL3 1982 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 TRIM75PA6NK02 468 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 GSG1L2A8MUP6 293 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 APPP05067 770 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 CYP2D6P10635 497 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 C12orf60Q5U649 245 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 CENPQQ7L2Z9 268 aaPredicted RBP31.07■■■□□ 2.56
CPSF6-205ENST00000550075 ANKRD23Q86SG2 305 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 SEC62Q99442 399 aaKnown RBP31.07■■■□□ 2.56
CPSF6-205ENST00000550075 CABP5Q9NP86 173 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 HELLSQ9NRZ9 838 aa31.07■■■□□ 2.56
CPSF6-205ENST00000550075 BTBD19C9JJ37 291 aa31.06■■■□□ 2.56
CPSF6-205ENST00000550075 PDE4AP27815 886 aa31.06■■■□□ 2.56
CPSF6-205ENST00000550075 SHMT1P34896 483 aa31.06■■■□□ 2.56
CPSF6-205ENST00000550075 TDO2P48775 406 aa31.06■■■□□ 2.56
CPSF6-205ENST00000550075 CCDC84Q86UT8 332 aaPredicted RBP31.06■■■□□ 2.56
CPSF6-205ENST00000550075 FAM43AQ8N2R8 423 aa31.06■■■□□ 2.56
CPSF6-205ENST00000550075 ZFYVE28Q9HCC9 887 aa31.06■■■□□ 2.56
CPSF6-205ENST00000550075 CRHR2Q13324 411 aa31.05■■■□□ 2.56
CPSF6-205ENST00000550075 ABCB5Q2M3G0 1257 aa31.05■■■□□ 2.56
CPSF6-205ENST00000550075 GPR25O00155 361 aa31.04■■■□□ 2.56
CPSF6-205ENST00000550075 GH2P01242 217 aa31.04■■■□□ 2.56
CPSF6-205ENST00000550075 SPP2Q13103 211 aa31.04■■■□□ 2.56
CPSF6-205ENST00000550075 SBK1Q52WX2 424 aa31.04■■■□□ 2.56
CPSF6-205ENST00000550075 CTR9Q6PD62 1173 aa31.04■■■□□ 2.56
CPSF6-205ENST00000550075 GADL1Q6ZQY3 521 aa31.04■■■□□ 2.56
CPSF6-205ENST00000550075 WDR18Q9BV38 432 aa31.04■■■□□ 2.56
CPSF6-205ENST00000550075 PATL2C9JE40 543 aaKnown RBP31.03■■■□□ 2.56
CPSF6-205ENST00000550075 HIP1O00291 1037 aa31.03■■■□□ 2.56
CPSF6-205ENST00000550075 LOC285556D6RIA3 1793 aa31.02■■■□□ 2.56
CPSF6-205ENST00000550075 CYP2D7A0A087X1C5 515 aa31.02■■■□□ 2.56
CPSF6-205ENST00000550075 C16orf86Q6ZW13 317 aa31.02■■■□□ 2.56
CPSF6-205ENST00000550075 EPB41L4AQ9HCS5 686 aaPredicted RBP31.02■■■□□ 2.56
CPSF6-205ENST00000550075 DIAPH3Q9NSV4 1193 aa31.02■■■□□ 2.56
CPSF6-205ENST00000550075 FKTNO75072 461 aa31.01■■■□□ 2.55
CPSF6-205ENST00000550075 MOGSQ13724 837 aa31.01■■■□□ 2.55
CPSF6-205ENST00000550075 MCMDC2Q4G0Z9 681 aa31.01■■■□□ 2.55
CPSF6-205ENST00000550075 TTC22Q5TAA0 569 aa31.01■■■□□ 2.55
CPSF6-205ENST00000550075 IFNL3Q8IZI9 196 aa31.01■■■□□ 2.55
CPSF6-205ENST00000550075 PROCA1Q8NCQ7 364 aaPredicted RBP31.01■■■□□ 2.55
CPSF6-205ENST00000550075 DYNLL2Q96FJ2 89 aa31.01■■■□□ 2.55
CPSF6-205ENST00000550075 NAPBQ9H115 298 aa31.01■■■□□ 2.55
CPSF6-205ENST00000550075 PDHXO00330 501 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 MFAP1P55081 439 aaKnown RBP31■■■□□ 2.55
CPSF6-205ENST00000550075 JAG1P78504 1218 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 EVX2Q03828 476 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 NMIQ13287 307 aaPredicted RBP31■■■□□ 2.55
CPSF6-205ENST00000550075 RAB3GAP1Q15042 981 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 TNS4Q8IZW8 715 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 SLC44A5Q8NCS7 719 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 ZNF296Q8WUU4 475 aaPredicted RBP31■■■□□ 2.55
CPSF6-205ENST00000550075 CCDC17Q96LX7 622 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 PARK7Q99497 189 aaKnown RBP31■■■□□ 2.55
CPSF6-205ENST00000550075 SLC45A1Q9Y2W3 748 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 ROBO3Q96MS0 1386 aa31■■■□□ 2.55
CPSF6-205ENST00000550075 A0A0D9SFI3 127 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 MINDY4BA8MYZ0 360 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 MPHOSPH10O00566 681 aaKnown RBP30.99■■■□□ 2.55
CPSF6-205ENST00000550075 SDSP20132 328 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 CDK8P49336 464 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 SHROOM1Q2M3G4 852 aaPredicted RBP30.99■■■□□ 2.55
CPSF6-205ENST00000550075 CCDC129Q6ZRS4 1044 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 CCDC136Q96JN2 1154 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 FAM227BQ96M60 508 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 R3HDMLQ9H3Y0 253 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 ZNF287Q9HBT7 754 aa30.99■■■□□ 2.55
CPSF6-205ENST00000550075 HMGCS2P54868 508 aa30.98■■■□□ 2.55
CPSF6-205ENST00000550075 MTMR2Q13614 643 aa30.98■■■□□ 2.55
CPSF6-205ENST00000550075 FEZ1Q99689 392 aa30.98■■■□□ 2.55
CPSF6-205ENST00000550075 TMOD4Q9NZQ9 345 aa30.98■■■□□ 2.55
CPSF6-205ENST00000550075 AGTPBP1Q9UPW5 1226 aa30.98■■■□□ 2.55
CPSF6-205ENST00000550075 C19orf81C9J6K1 198 aa30.97■■■□□ 2.55
CPSF6-205ENST00000550075 USP17L10C9JJH3 530 aa30.97■■■□□ 2.55
CPSF6-205ENST00000550075 BACE1P56817 501 aa30.97■■■□□ 2.55
CPSF6-205ENST00000550075 PABPC4Q13310 644 aaKnown RBP eCLIP30.97■■■□□ 2.55
CPSF6-205ENST00000550075 SH3D19Q5HYK7 790 aa30.97■■■□□ 2.55
CPSF6-205ENST00000550075 GPAT2Q6NUI2 795 aa30.97■■■□□ 2.55
CPSF6-205ENST00000550075 TMEM179Q6ZVK1 233 aa30.97■■■□□ 2.55
CPSF6-205ENST00000550075 TLR2O60603 784 aa30.96■■■□□ 2.55
CPSF6-205ENST00000550075 SLC3A2P08195 630 aaKnown RBP30.96■■■□□ 2.55
CPSF6-205ENST00000550075 PNMA3Q9UL41 463 aa30.96■■■□□ 2.55
CPSF6-205ENST00000550075 CCDC171Q6TFL3 1326 aa30.96■■■□□ 2.55
CPSF6-205ENST00000550075 GSPT1P15170 499 aaKnown RBP30.94■■■□□ 2.54
CPSF6-205ENST00000550075 ERO1AQ96HE7 468 aa30.94■■■□□ 2.54
CPSF6-205ENST00000550075 MKNK2Q9HBH9 465 aa30.94■■■□□ 2.54
CPSF6-205ENST00000550075 USP14P54578 494 aa30.93■■■□□ 2.54
CPSF6-205ENST00000550075 SP3Q02447 781 aa30.93■■■□□ 2.54
CPSF6-205ENST00000550075 SEPT2Q15019 361 aa30.93■■■□□ 2.54
CPSF6-205ENST00000550075 CTU1Q7Z7A3 348 aaKnown RBP30.93■■■□□ 2.54
CPSF6-205ENST00000550075 AKR1B1P15121 316 aa30.92■■■□□ 2.54
CPSF6-205ENST00000550075 USP17L2Q6R6M4 530 aa30.92■■■□□ 2.54
CPSF6-205ENST00000550075 SMIM22K7EJ46 135 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms