RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 PPP1R16BQ96T49 567 aa8.13□□□□□ -1.11
CCDC38-208ENST00000549876 WNT10AQ9GZT5 417 aa8.13□□□□□ -1.11
CCDC38-208ENST00000549876 CAPN6Q9Y6Q1 641 aa8.13□□□□□ -1.11
CCDC38-208ENST00000549876 PRAMEF27A3QJZ7 478 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
CCDC38-208ENST00000549876 KRT1P04264 644 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 CDKAL1Q5VV42 579 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 ALG1LQ6GMV1 187 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 MFSD2AQ8NA29 543 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 RIN3Q8TB24 985 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 TOX2Q96NM4 488 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 MIPEPQ99797 713 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 WWC3Q9ULE0 1092 aa8.12□□□□□ -1.11
CCDC38-208ENST00000549876 H3BS24 57 aa8.11□□□□□ -1.11
CCDC38-208ENST00000549876 FGD1P98174 961 aa8.11□□□□□ -1.11
CCDC38-208ENST00000549876 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
CCDC38-208ENST00000549876 SYDE1Q6ZW31 735 aaPredicted RBP8.11□□□□□ -1.11
CCDC38-208ENST00000549876 HDXQ7Z353 690 aa8.11□□□□□ -1.11
CCDC38-208ENST00000549876 TPX2Q9ULW0 747 aaKnown RBP8.11□□□□□ -1.11
CCDC38-208ENST00000549876 MPZL3Q6UWV2 235 aa8.1□□□□□ -1.11
CCDC38-208ENST00000549876 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
CCDC38-208ENST00000549876 THAP5Q7Z6K1 395 aa8.1□□□□□ -1.11
CCDC38-208ENST00000549876 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
CCDC38-208ENST00000549876 SNCAIPQ9Y6H5 919 aa8.1□□□□□ -1.11
CCDC38-208ENST00000549876 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
CCDC38-208ENST00000549876 CDK8P49336 464 aa8.09□□□□□ -1.11
CCDC38-208ENST00000549876 LETMD1Q6P1Q0 360 aa8.09□□□□□ -1.11
CCDC38-208ENST00000549876 SV2BQ7L1I2 683 aa8.09□□□□□ -1.11
CCDC38-208ENST00000549876 HID1Q8IV36 788 aa8.09□□□□□ -1.11
CCDC38-208ENST00000549876 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
CCDC38-208ENST00000549876 CST3P01034 146 aaPredicted RBP8.08□□□□□ -1.12
CCDC38-208ENST00000549876 USP17L7P0C7H9 530 aa8.08□□□□□ -1.12
CCDC38-208ENST00000549876 ANKLE2Q86XL3 938 aa8.08□□□□□ -1.12
CCDC38-208ENST00000549876 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
CCDC38-208ENST00000549876 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
CCDC38-208ENST00000549876 ALPK1Q96QP1 1244 aa8.08□□□□□ -1.12
CCDC38-208ENST00000549876 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
CCDC38-208ENST00000549876 C1QTNF9P0C862 333 aa8.07□□□□□ -1.12
CCDC38-208ENST00000549876 ETF1P62495 437 aaKnown RBP8.07□□□□□ -1.12
CCDC38-208ENST00000549876 WIPI1Q5MNZ9 446 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-208ENST00000549876 ZNF746Q6NUN9 644 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-208ENST00000549876 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
CCDC38-208ENST00000549876 ZSCAN29Q8IWY8 852 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-208ENST00000549876 CCDC120Q96HB5 630 aa8.07□□□□□ -1.12
CCDC38-208ENST00000549876 PRAMEF13Q5VWM6 474 aa8.06□□□□□ -1.12
CCDC38-208ENST00000549876 FBXO15Q8NCQ5 510 aaPredicted RBP8.06□□□□□ -1.12
CCDC38-208ENST00000549876 ZSCAN18Q8TBC5 510 aaPredicted RBP8.06□□□□□ -1.12
CCDC38-208ENST00000549876 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
CCDC38-208ENST00000549876 COX4I2Q96KJ9 171 aa8.06□□□□□ -1.12
CCDC38-208ENST00000549876 GFRA2O00451 464 aa8.05□□□□□ -1.12
CCDC38-208ENST00000549876 CBX7O95931 251 aa8.05□□□□□ -1.12
CCDC38-208ENST00000549876 KIR3DL1P43629 444 aa8.05□□□□□ -1.12
CCDC38-208ENST00000549876 TNK2Q07912 1038 aa8.05□□□□□ -1.12
CCDC38-208ENST00000549876 TTBK2Q6IQ55 1244 aa8.05□□□□□ -1.12
CCDC38-208ENST00000549876 DIRC2Q96SL1 478 aa8.05□□□□□ -1.12
CCDC38-208ENST00000549876 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
CCDC38-208ENST00000549876 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
CCDC38-208ENST00000549876 ESR1P03372 595 aa8.04□□□□□ -1.12
CCDC38-208ENST00000549876 GRK4P32298 578 aa8.04□□□□□ -1.12
CCDC38-208ENST00000549876 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
CCDC38-208ENST00000549876 ZSWIM5Q9P217 1185 aa8.04□□□□□ -1.12
CCDC38-208ENST00000549876 TACC3Q9Y6A5 838 aa8.04□□□□□ -1.12
CCDC38-208ENST00000549876 CYP7A1P22680 504 aa8.03□□□□□ -1.12
CCDC38-208ENST00000549876 RPS26P62854 115 aaKnown RBP8.03□□□□□ -1.12
CCDC38-208ENST00000549876 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
CCDC38-208ENST00000549876 XAGE3Q8WTP9 111 aa8.03□□□□□ -1.12
CCDC38-208ENST00000549876 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
CCDC38-208ENST00000549876 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
CCDC38-208ENST00000549876 DNAJC25-GNG10A0A024R161 153 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 NFIBO00712 420 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 ZSCAN22P10073 491 aaPredicted RBP8.02□□□□□ -1.13
CCDC38-208ENST00000549876 RALGPS1Q5JS13 557 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 CDH24Q86UP0 819 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 ABHD4Q8TB40 342 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 KRTAP4-11Q9BYQ6 195 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 KCNK12Q9HB15 430 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 TJP2Q9UDY2 1190 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 PCDHB5Q9Y5E4 795 aa8.02□□□□□ -1.13
CCDC38-208ENST00000549876 P4HBP07237 508 aaKnown RBP8.01□□□□□ -1.13
CCDC38-208ENST00000549876 KCNA1Q09470 495 aa8.01□□□□□ -1.13
CCDC38-208ENST00000549876 TMPRSS7Q7RTY8 843 aa8.01□□□□□ -1.13
CCDC38-208ENST00000549876 AMIGO3Q86WK7 504 aa8.01□□□□□ -1.13
CCDC38-208ENST00000549876 MRPL41Q8IXM3 137 aaKnown RBP8.01□□□□□ -1.13
CCDC38-208ENST00000549876 PIWIL2Q8TC59 973 aaKnown RBP8.01□□□□□ -1.13
CCDC38-208ENST00000549876 FRMD6Q96NE9 622 aa8.01□□□□□ -1.13
CCDC38-208ENST00000549876 CD320Q9NPF0 282 aa8.01□□□□□ -1.13
CCDC38-208ENST00000549876 MED14OSP0DP75 135 aa8□□□□□ -1.13
CCDC38-208ENST00000549876 RAC2P15153 192 aa8□□□□□ -1.13
CCDC38-208ENST00000549876 ERVFC1P60507 584 aa8□□□□□ -1.13
CCDC38-208ENST00000549876 SEPT6Q14141 434 aa8□□□□□ -1.13
CCDC38-208ENST00000549876 TRAIPQ9BWF2 469 aa8□□□□□ -1.13
CCDC38-208ENST00000549876 EPB41L4BQ9H329 900 aa8□□□□□ -1.13
CCDC38-208ENST00000549876 TMEM59LQ9UK28 342 aa8□□□□□ -1.13
CCDC38-208ENST00000549876 WASH4PA8MWX3 477 aa7.99□□□□□ -1.13
CCDC38-208ENST00000549876 HPXP02790 462 aa7.99□□□□□ -1.13
CCDC38-208ENST00000549876 Q96M66 194 aa7.99□□□□□ -1.13
CCDC38-208ENST00000549876 DPH2Q9BQC3 489 aaPredicted RBP7.99□□□□□ -1.13
CCDC38-208ENST00000549876 DCP1AQ9NPI6 582 aaPredicted RBP7.99□□□□□ -1.13
CCDC38-208ENST00000549876 NPIPB6E9PJ23 425 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms