RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 ALADP13716 330 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 CYP2C19P33261 490 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 GCKRQ14397 625 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 Q3C1V9 767 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 CCDC174Q6PII3 467 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 HLA-CQ95604 372 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 ZNF594Q96JF6 807 aaPredicted RBP10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 PORCNQ9H237 461 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 NDUFB9Q9Y6M9 179 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
SMARCD1-207ENST00000549526 ZNF316A6NFI3 1004 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 GTPBP6O43824 516 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 GLRX3O76003 335 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 CAVIN4Q5BKX8 364 aa10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 TRPV1Q8NER1 839 aa10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 RBPJLQ9UBG7 517 aa10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 SUGT1Q9Y2Z0 365 aa10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-207ENST00000549526 HERVK_113P62684 666 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 ERVK-24P63145 666 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 CCDC57Q2TAC2 916 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 TMEM240Q5SV17 173 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 WDR78Q5VTH9 848 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 C16orf59Q7L2K0 433 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 FBXO33Q7Z6M2 555 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 PAGR1Q9BTK6 254 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 ATRNL1Q5VV63 1379 aa10.48□□□□□ -0.73
SMARCD1-207ENST00000549526 TIMP1P01033 207 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 SSTR3P32745 418 aaPredicted RBP10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 RGS3P49796 1198 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 MAP3K10Q02779 954 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 FAAP100Q0VG06 881 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 WDR43Q15061 677 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 LRRC41Q15345 812 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 RASIP1Q5U651 963 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 PPP2R2DQ66LE6 453 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 MFSD5Q6N075 450 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 GJD3Q8N144 294 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 YBX2Q9Y2T7 364 aaKnown RBP10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 MTCH2Q9Y6C9 303 aa10.47□□□□□ -0.73
SMARCD1-207ENST00000549526 DCDC2CA8MYV0 355 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 RFXAPO00287 272 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 ACRP10323 421 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 CASP7P55210 303 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 FOXO4P98177 505 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 DIXDC1Q155Q3 683 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 CCDC30Q5VVM6 783 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 TBC1D2Q9BYX2 928 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 MYH16Q9H6N6 1097 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 MBIPQ9NS73 344 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 TMOD4Q9NZQ9 345 aa10.46□□□□□ -0.73
SMARCD1-207ENST00000549526 ATAD5Q96QE3 1844 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 DDTLA6NHG4 134 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 SLC15A5A6NIM6 579 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 APBB1O00213 710 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 ENTPD3O75355 529 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 CYBAP13498 195 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 CSF2RAP15509 400 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 HOXA7P31268 230 aaPredicted RBP10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 RABGGTBP53611 331 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 LMBR1LQ6UX01 489 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 SH3BP5LQ7L8J4 393 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 NPLOC4Q8TAT6 608 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 ANKS1AQ92625 1134 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 PHF24Q9UPV7 400 aa10.45□□□□□ -0.74
SMARCD1-207ENST00000549526 CACNA1GO43497 2377 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 SEPT4O43236 478 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 GFRA3O60609 400 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 SLC5A1P13866 664 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 POU3F3P20264 500 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 PTPREP23469 700 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 KRT40Q6A162 431 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 CCDC146Q8IYE0 955 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 TMEM199Q8N511 208 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 MFSD14AQ96MC6 490 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 CHMP4AQ9BY43 222 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 AS3MTQ9HBK9 375 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 TRIM35Q9UPQ4 493 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 IVNS1ABPQ9Y6Y0 642 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 ZFHX2Q9C0A1 2572 aaPredicted RBP10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 TRIOO75962 3097 aa10.44□□□□□ -0.74
SMARCD1-207ENST00000549526 ZNF521Q96K83 1311 aa10.43□□□□□ -0.74
SMARCD1-207ENST00000549526 FAM196BA6NMK8 535 aa10.43□□□□□ -0.74
SMARCD1-207ENST00000549526 KRT37O76014 449 aa10.43□□□□□ -0.74
SMARCD1-207ENST00000549526 HOXC6P09630 235 aa10.43□□□□□ -0.74
SMARCD1-207ENST00000549526 MYOGP15173 224 aa10.43□□□□□ -0.74
SMARCD1-207ENST00000549526 CCNA1P78396 465 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms