RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
RAB5B-206ENST00000549505 ZNF500O60304 480 aaPredicted RBP11.57□□□□□ -0.56
RAB5B-206ENST00000549505 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
RAB5B-206ENST00000549505 SARM1Q6SZW1 724 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
RAB5B-206ENST00000549505 NFXL1Q6ZNB6 911 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 NOSTRINQ8IVI9 506 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 TRIM22Q8IYM9 498 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 ANKIB1Q9P2G1 1089 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 CLIC4Q9Y696 253 aa11.57□□□□□ -0.56
RAB5B-206ENST00000549505 ESPNB1AK53 854 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 C16orf86Q6ZW13 317 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 ZSCAN30Q86W11 494 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 DZIP1Q86YF9 867 aaKnown RBP11.56□□□□□ -0.56
RAB5B-206ENST00000549505 IQSEC3Q9UPP2 1182 aaPredicted RBP11.56□□□□□ -0.56
RAB5B-206ENST00000549505 CNTNAP5Q8WYK1 1306 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 CUTAO60888 179 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 CDC25BP30305 580 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 NPY5RQ15761 445 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 RILPL1Q5EBL4 403 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 CATIPQ7Z7H3 387 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 MICU3Q86XE3 530 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 RRAGDQ9NQL2 400 aaPredicted RBP11.56□□□□□ -0.56
RAB5B-206ENST00000549505 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
RAB5B-206ENST00000549505 CCDC39Q9UFE4 941 aa11.56□□□□□ -0.56
RAB5B-206ENST00000549505 GOLGA6L4A6NEF3 574 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.55□□□□□ -0.56
RAB5B-206ENST00000549505 JMYQ8N9B5 988 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
RAB5B-206ENST00000549505 DTNBO60941 627 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 UFL1O94874 794 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
RAB5B-206ENST00000549505 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 DAGLBQ8NCG7 672 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 LZTS2Q9BRK4 669 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 MYH1P12882 1939 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 TOB1P50616 345 aaPredicted RBP11.55□□□□□ -0.56
RAB5B-206ENST00000549505 GRM4Q14833 912 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 IQCB1Q15051 598 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 IFIT1BQ5T764 474 aaKnown RBP11.55□□□□□ -0.56
RAB5B-206ENST00000549505 SH3RF3Q8TEJ3 882 aaPredicted RBP11.55□□□□□ -0.56
RAB5B-206ENST00000549505 ZNF287Q9HBT7 754 aa11.55□□□□□ -0.56
RAB5B-206ENST00000549505 SIPA1L1O43166 1804 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 IGKV6D-41A0A0C4DH26 115 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 BMP15O95972 392 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 TRAPPC10P48553 1259 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 GABPAQ06546 454 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 TRIM29Q14134 588 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 GRIK5Q16478 980 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 HHIPL2Q6UWX4 724 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 CCDC73Q6ZRK6 1079 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 PHKBQ93100 1093 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 IL17RBQ9NRM6 502 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 M0R2N6 131 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 TPM3P06753 285 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 GUCY1A2P33402 732 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 SLC26A6Q9BXS9 759 aa11.54□□□□□ -0.56
RAB5B-206ENST00000549505 FTOQ9C0B1 505 aaKnown RBP eCLIP11.54□□□□□ -0.56
RAB5B-206ENST00000549505 MINDY4BA8MYZ0 360 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 PTPREP23469 700 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 NT5DC1Q5TFE4 455 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 GALNT17Q6IS24 598 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 BICD2Q8TD16 824 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-206ENST00000549505 GNAQP50148 359 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 STX1AQ16623 288 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 PFKFB3Q16875 520 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-206ENST00000549505 OTUD7BQ6GQQ9 843 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 PLA2G4DQ86XP0 818 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 NEDD1Q8NHV4 660 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 NAP1L5Q96NT1 182 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-206ENST00000549505 SMIM22K7EJ46 135 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 MYO1BO43795 1136 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 STK38Q15208 465 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 CCDC24Q8N4L8 307 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 FSIP1Q8NA03 581 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 FBXO2Q9UK22 296 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-206ENST00000549505 ZKSCAN5Q9Y2L8 839 aa11.53□□□□□ -0.56
RAB5B-206ENST00000549505 FLT1P17948 1338 aa11.52□□□□□ -0.56
RAB5B-206ENST00000549505 CYP2D7A0A087X1C5 515 aa11.52□□□□□ -0.56
RAB5B-206ENST00000549505 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.56
RAB5B-206ENST00000549505 XBP1P17861 261 aa11.52□□□□□ -0.56
RAB5B-206ENST00000549505 RASA1P20936 1047 aa11.52□□□□□ -0.56
RAB5B-206ENST00000549505 RBM10P98175 930 aaKnown RBP11.52□□□□□ -0.56
RAB5B-206ENST00000549505 SF3A1Q15459 793 aaKnown RBP11.52□□□□□ -0.56
RAB5B-206ENST00000549505 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.56
RAB5B-206ENST00000549505 STK11IPQ8N1F8 1099 aa11.52□□□□□ -0.56
RAB5B-206ENST00000549505 MYL10Q9BUA6 226 aa11.52□□□□□ -0.56
RAB5B-206ENST00000549505 EHD4Q9H223 541 aa11.52□□□□□ -0.56
RAB5B-206ENST00000549505 SRPRBQ9Y5M8 271 aaKnown RBP11.52□□□□□ -0.56
RAB5B-206ENST00000549505 KIF5BP33176 963 aa11.52□□□□□ -0.57
RAB5B-206ENST00000549505 NDUFA8P51970 172 aa11.52□□□□□ -0.57
RAB5B-206ENST00000549505 MDM2Q00987 491 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-206ENST00000549505 GUCY1B3Q02153 619 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms