RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 HERVK_113P62684 666 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 MAFAQ8NHW3 353 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 USP6NLQ92738 828 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 SEMA6BQ9H3T3 888 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 MRS2Q9HD23 443 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 PRKAG2Q9UGJ0 569 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 PLXNB2O15031 1838 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 DOCK3Q8IZD9 2030 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 COL2A1P02458 1487 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 IL15P40933 162 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 SHHQ15465 462 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 MORN1Q5T089 497 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 GPR142Q7Z601 462 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 ZNF384Q8TF68 577 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 PORCNQ9H237 461 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
TRAFD1-206ENST00000549358 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 ERVK-24P63145 666 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 JAG1P78504 1218 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 PLEKHH3Q7Z736 793 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 MYLIPQ8WY64 445 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 APBA2Q99767 749 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 PAGR1Q9BTK6 254 aa13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 HERC5Q9UII4 1024 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 PA2G4Q9UQ80 394 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 PDS5AQ29RF7 1337 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-206ENST00000549358 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 LDHCP07864 332 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 CNGA1P29973 690 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 GSTO1P78417 241 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 POTEEQ6S8J3 1075 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 EDC3Q96F86 508 aaKnown RBP13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 PI4KBQ9UBF8 816 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
TRAFD1-206ENST00000549358 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 ASNSP08243 561 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 MAP2K5Q13163 448 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 C9orf50Q5SZB4 431 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 MFSD14CQ5VZR4 134 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 TEX11Q8IYF3 940 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 LPAR1Q92633 364 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 XAGE2Q96GT9 111 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 FLRT1Q9NZU1 646 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
TRAFD1-206ENST00000549358 A0A1B0GUL7 405 aa13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 DNM1LO00429 736 aa13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 FOSL2P15408 326 aa13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 RTP1P59025 263 aa13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 SHROOM1Q2M3G4 852 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 SH3RF3Q8TEJ3 882 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 SYMPKQ92797 1274 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 DHX36Q9H2U1 1008 aaKnown RBP13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 PRDM5Q9NQX1 630 aaPredicted RBP13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
TRAFD1-206ENST00000549358 GLRX3O76003 335 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 GDF11O95390 407 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 MVPQ14764 893 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 PI16Q6UXB8 463 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 SPATA5Q8NB90 893 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 BADQ92934 168 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 COPRSQ9NQ92 184 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 EMILIN3Q9NT22 766 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 PRUNE2Q8WUY3 3088 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 CDH23Q9H251 3354 aa13.34□□□□□ -0.27
TRAFD1-206ENST00000549358 MSCO60682 206 aa13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 COL9A1P20849 921 aa13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 CYP2C19P33261 490 aa13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 SMAD3P84022 425 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 TFCP2Q12800 502 aa13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 GJC2Q5T442 439 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 GTF3C2Q8WUA4 911 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 DNAJC18Q9H819 358 aa13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 AKAP2Q9Y2D5 859 aa13.33□□□□□ -0.28
TRAFD1-206ENST00000549358 ATAD5Q96QE3 1844 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 SLC15A5A6NIM6 579 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 CNMDO75829 334 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 PTPREP23469 700 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 CCNA1P78396 465 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L2Q6R6M4 530 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 SLC39A5Q6ZMH5 540 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms