RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 SWAP70Q9UH65 585 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 SERPINB13Q9UIV8 391 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 HPS5Q9UPZ3 1129 aa14.15□□□□□ -0.14
PTPRR-209ENST00000549308 SBF1O95248 1867 aa14.14□□□□□ -0.15
PTPRR-209ENST00000549308 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
PTPRR-209ENST00000549308 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
PTPRR-209ENST00000549308 RBM26Q5T8P6 1007 aaKnown RBP14.14□□□□□ -0.15
PTPRR-209ENST00000549308 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
PTPRR-209ENST00000549308 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
PTPRR-209ENST00000549308 CRACR2BQ8N4Y2 399 aaPredicted RBP14.14□□□□□ -0.15
PTPRR-209ENST00000549308 MYL10Q9BUA6 226 aa14.14□□□□□ -0.15
PTPRR-209ENST00000549308 RNF181Q9P0P0 153 aa14.14□□□□□ -0.15
PTPRR-209ENST00000549308 CNOT7Q9UIV1 285 aaKnown RBP14.14□□□□□ -0.15
PTPRR-209ENST00000549308 DDTLA6NHG4 134 aaPredicted RBP14.13□□□□□ -0.15
PTPRR-209ENST00000549308 CPLX1O14810 134 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 NMT2O60551 498 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 JAK2O60674 1132 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 RXRAP19793 462 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 GABPAQ06546 454 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 CCDC144CPQ8IYA2 1237 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 ZNF654Q8IZM8 581 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 NSUN7Q8NE18 718 aaKnown RBP14.13□□□□□ -0.15
PTPRR-209ENST00000549308 ZBED3Q96IU2 234 aaPredicted RBP14.13□□□□□ -0.15
PTPRR-209ENST00000549308 EHD4Q9H223 541 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 PI4KBQ9UBF8 816 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 MYH8P13535 1937 aa14.13□□□□□ -0.15
PTPRR-209ENST00000549308 PTPDC1A2A3K4 754 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 H7C1D1 291 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 HMGN5P82970 282 aaKnown RBP14.12□□□□□ -0.15
PTPRR-209ENST00000549308 PKP1Q13835 747 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 GPR162Q16538 588 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 CPLX2Q6PUV4 134 aaKnown RBP14.12□□□□□ -0.15
PTPRR-209ENST00000549308 SH3BP5LQ7L8J4 393 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 CATIPQ7Z7H3 387 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 FAM184AQ8NB25 1140 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 SMARCC2Q8TAQ2 1214 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 NUP133Q8WUM0 1156 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 FAM151AQ8WW52 585 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 DDX11Q96FC9 970 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 TCP11L1Q9NUJ3 509 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
PTPRR-209ENST00000549308 WNT10BO00744 389 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 CTDNEP1O95476 244 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 NBPF9Q3BBW0 867 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 FOXD4L5Q5VV16 416 aaPredicted RBP14.12□□□□□ -0.15
PTPRR-209ENST00000549308 FOXP4Q8IVH2 680 aaPredicted RBP14.12□□□□□ -0.15
PTPRR-209ENST00000549308 NEDD1Q8NHV4 660 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 FOXD4L4Q8WXT5 416 aaPredicted RBP14.12□□□□□ -0.15
PTPRR-209ENST00000549308 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
PTPRR-209ENST00000549308 KAT14Q9H8E8 782 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 KIF3AQ9Y496 699 aa14.12□□□□□ -0.15
PTPRR-209ENST00000549308 SIPA1L1O43166 1804 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 CALM1P0DP23 149 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 CALM2P0DP24 149 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 CALM3P0DP25 149 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 PDCP20941 246 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 SYT1P21579 422 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 SHMT1P34896 483 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 RCAN1P53805 252 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 RTN1Q16799 776 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 TBC1D10BQ4KMP7 808 aaPredicted RBP14.11□□□□□ -0.15
PTPRR-209ENST00000549308 FKBP1CQ5VVH2 108 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 LARP1BQ659C4 914 aaKnown RBP14.11□□□□□ -0.15
PTPRR-209ENST00000549308 SAMD7Q7Z3H4 446 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 GPC2Q8N158 579 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 IL17RBQ9NRM6 502 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 NID2Q14112 1375 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 ATRNL1Q5VV63 1379 aa14.11□□□□□ -0.15
PTPRR-209ENST00000549308 WDR33Q9C0J8 1336 aaKnown RBP14.1□□□□□ -0.15
PTPRR-209ENST00000549308 CNTNAP1P78357 1384 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 STX6O43752 255 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 CDKL5O76039 1030 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 DDAH1O94760 285 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 BRD1O95696 1058 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 AKR1B1P15121 316 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 CDC27P30260 824 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 ADD1P35611 737 aaKnown RBP14.1□□□□□ -0.15
PTPRR-209ENST00000549308 TNNI2P48788 182 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 KIF4BQ2VIQ3 1234 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 C9orf131Q5VYM1 1079 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 CSRNP1Q96S65 589 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 ZDHHC9Q9Y397 364 aa14.1□□□□□ -0.15
PTPRR-209ENST00000549308 PLIN4Q96Q06 1357 aa14.09□□□□□ -0.15
PTPRR-209ENST00000549308 CCDC196A0A1B0GTZ2 297 aa14.09□□□□□ -0.15
PTPRR-209ENST00000549308 VPS37CA5D8V6 355 aaPredicted RBP14.09□□□□□ -0.15
PTPRR-209ENST00000549308 MPHOSPH10O00566 681 aaKnown RBP14.09□□□□□ -0.15
PTPRR-209ENST00000549308 PPFIA3O75145 1194 aa14.09□□□□□ -0.15
PTPRR-209ENST00000549308 RCSD1Q6JBY9 416 aa14.09□□□□□ -0.15
PTPRR-209ENST00000549308 FAM83AQ86UY5 434 aa14.09□□□□□ -0.15
PTPRR-209ENST00000549308 ANKS1AQ92625 1134 aa14.09□□□□□ -0.15
PTPRR-209ENST00000549308 CCDC17Q96LX7 622 aa14.09□□□□□ -0.15
PTPRR-209ENST00000549308 FAM196BA6NMK8 535 aa14.08□□□□□ -0.15
PTPRR-209ENST00000549308 EGFRP00533 1210 aa14.08□□□□□ -0.15
PTPRR-209ENST00000549308 SLURP2P0DP57 97 aa14.08□□□□□ -0.15
PTPRR-209ENST00000549308 PDIA4P13667 645 aaKnown RBP14.08□□□□□ -0.15
PTPRR-209ENST00000549308 FANCBQ8NB91 859 aa14.08□□□□□ -0.15
PTPRR-209ENST00000549308 DNAJC18Q9H819 358 aa14.08□□□□□ -0.15
PTPRR-209ENST00000549308 FAM217BQ9NTX9 383 aaPredicted RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms