RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 METTL3Q86U44 580 aaKnown RBP5.82□□□□□ -1.48
SCAF11-212ENST00000549162 ZNF710Q8N1W2 664 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 SHCBP1Q8NEM2 672 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 KRT23Q9C075 422 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 PRM3Q9NNZ6 103 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 DENND4AQ7Z401 1863 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 LAD1O00515 517 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 ZPR1O75312 459 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 AP1G2O75843 785 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 MYL1P05976 194 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 GRM4Q14833 912 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 CCDC57Q2TAC2 916 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 FOXP4Q8IVH2 680 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-212ENST00000549162 SPATA20Q8TB22 786 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 FAXDC2Q96IV6 333 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 SNX14Q9Y5W7 946 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 STAM2O75886 525 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 NASPP49321 788 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-212ENST00000549162 RSBN1LQ6PCB5 846 aaPredicted RBP5.82□□□□□ -1.48
SCAF11-212ENST00000549162 ABRAQ8N0Z2 381 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 REPS2Q8NFH8 660 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 RBM33Q96EV2 1170 aaKnown RBP5.82□□□□□ -1.48
SCAF11-212ENST00000549162 TIGD1Q96MW7 591 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 MAGEF1Q9HAY2 307 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 KCNQ5Q9NR82 932 aa5.82□□□□□ -1.48
SCAF11-212ENST00000549162 PMM2O15305 246 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 CIITAP33076 1130 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 MOGSQ13724 837 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 RASGRF1Q13972 1273 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 RNF41Q9H4P4 317 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-212ENST00000549162 ATG2AQ2TAZ0 1938 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 C1RP00736 705 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 USP17L8P0C7I0 530 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 BCRP11274 1271 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 TOB2Q14106 344 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-212ENST00000549162 PTF1AQ7RTS3 328 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 ANKRD13AQ8IZ07 590 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 EMID1Q96A84 441 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-212ENST00000549162 POLLQ9UGP5 575 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 NIP7Q9Y221 180 aaKnown RBP eCLIP5.81□□□□□ -1.48
SCAF11-212ENST00000549162 SLC27A2O14975 620 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 PDE6AP16499 860 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 ERCC3P19447 782 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 CCDC158Q5M9N0 1113 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 LDLRAD1Q5T700 205 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 APOBEC3HQ6NTF7 200 aaKnown RBP5.81□□□□□ -1.48
SCAF11-212ENST00000549162 CASC1Q6TDU7 716 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 TMC2Q8TDI7 906 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 FAM151AQ8WW52 585 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 UBXN4Q92575 508 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 RNF26Q9BY78 433 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-212ENST00000549162 ALG2Q9H553 416 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 EPB41L4AQ9HCS5 686 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-212ENST00000549162 CEP126Q9P2H0 1117 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 ABCB11O95342 1321 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 NEDD4P46934 1319 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 EMSYQ7Z589 1322 aa5.81□□□□□ -1.48
SCAF11-212ENST00000549162 NFKBIEO00221 500 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 PRPF3O43395 683 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 HOXC8P31273 242 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 MAGEB6Q8N7X4 407 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 STK32AQ8WU08 396 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 TBC1D7Q9P0N9 293 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 HPS5Q9UPZ3 1129 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 MAFBQ9Y5Q3 323 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 PARP3Q9Y6F1 533 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 ANKRD62A6NC57 917 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 HSPD1P10809 573 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 RFC4P35249 363 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 TSR1Q2NL82 804 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 TSPAN18Q96SJ8 248 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 PIH1D3Q9NQM4 214 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 C9orf78Q9NZ63 289 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 GGA1Q9UJY5 639 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 TBX3O15119 743 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 IFNAR1P17181 557 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 GREB1Q4ZG55 1949 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 TMEM164Q5U3C3 297 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 ZNF662Q6ZS27 426 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 UBE3BQ7Z3V4 1068 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 STRN4Q9NRL3 753 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 ZNRF3Q9ULT6 936 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 DIS3Q9Y2L1 958 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 NYNRINQ9P2P1 1898 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 A0A1W2PQ27 194 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 A0A1W2PQ64 194 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 A0A1W2PQD8 194 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 LYPLA2O95372 231 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 TAGLNQ01995 201 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 RBL2Q08999 1139 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 LRRC24Q50LG9 513 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 NAALADL2Q58DX5 795 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 APOBEC3FQ8IUX4 373 aaKnown RBP5.8□□□□□ -1.48
SCAF11-212ENST00000549162 GTF3C6Q969F1 213 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 ZMIZ1Q9ULJ6 1067 aa5.8□□□□□ -1.48
SCAF11-212ENST00000549162 PTPRSQ13332 1948 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 F6X3S4 739 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 PITPNM1O00562 1244 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 ANTXR2P58335 489 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms