RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 LRP2BPQ9P2M1 347 aa19.13■□□□□ 0.65
CHMP1A-206ENST00000549139 SMARCA5O60264 1052 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 LDHCP07864 332 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 MECOMQ03112 1051 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 C7orf61Q8IZ16 206 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 DEFB123Q8N688 67 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 NSUN4Q96CB9 384 aaKnown RBP19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 RAI14Q9P0K7 980 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 GJD2Q9UKL4 321 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 TAOK2Q9UL54 1235 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 ZMYND8Q9ULU4 1186 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 VCANP13611 3396 aa19.12■□□□□ 0.65
CHMP1A-206ENST00000549139 HMGCRP04035 888 aa19.11■□□□□ 0.65
CHMP1A-206ENST00000549139 GSTO1P78417 241 aa19.11■□□□□ 0.65
CHMP1A-206ENST00000549139 Q7L0L9 218 aa19.11■□□□□ 0.65
CHMP1A-206ENST00000549139 STXBP5LQ9Y2K9 1186 aa19.11■□□□□ 0.65
CHMP1A-206ENST00000549139 MAST2Q6P0Q8 1798 aa19.11■□□□□ 0.65
CHMP1A-206ENST00000549139 RPTORQ8N122 1335 aa19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 PLXNB2O15031 1838 aa19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 TRIM32Q13049 653 aa19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 PROCA1Q8NCQ7 364 aaPredicted RBP19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 ZNF384Q8TF68 577 aa19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 MTMR10Q9NXD2 777 aa19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 LOC285556D6RIA3 1793 aa19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 DDX60LQ5H9U9 1706 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-206ENST00000549139 LAMA2P24043 3122 aaKnown RBP19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 MROH7-TTC4A0A0A0MT08 1334 aa19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 GPR75-ASB3A0A0A6YYF3 556 aa19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 TBC1D12O60347 775 aa19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 ATP5JP18859 108 aa19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 MAGEA10P43363 369 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 ZSCAN29Q8IWY8 852 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 NBPF3Q9H094 633 aa19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 RWDD1Q9H446 243 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 PNMA3Q9UL41 463 aa19.09■□□□□ 0.65
CHMP1A-206ENST00000549139 GCLCP48506 637 aaPredicted RBP19.08■□□□□ 0.64
CHMP1A-206ENST00000549139 TTF1Q15361 905 aaPredicted RBP19.08■□□□□ 0.64
CHMP1A-206ENST00000549139 TDHQ8IZJ6 230 aa19.08■□□□□ 0.64
CHMP1A-206ENST00000549139 PIH1D3Q9NQM4 214 aaKnown RBP19.08■□□□□ 0.64
CHMP1A-206ENST00000549139 OGDHLQ9ULD0 1010 aa19.08■□□□□ 0.64
CHMP1A-206ENST00000549139 TTC28Q96AY4 2481 aa19.08■□□□□ 0.64
CHMP1A-206ENST00000549139 MAP4K4O95819 1239 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 SYN1P17600 705 aa19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 BTDP43251 543 aa19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 RHBDL3P58872 404 aa19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 NAA16Q6N069 864 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 TMED8Q6PL24 325 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 C11orf49Q9H6J7 331 aa19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 ANTXR1Q9H6X2 564 aa19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 HMX1Q9NP08 348 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 NDUFB9Q9Y6M9 179 aa19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 MYH7P12883 1935 aa19.07■□□□□ 0.64
CHMP1A-206ENST00000549139 PFASO15067 1338 aa19.06■□□□□ 0.64
CHMP1A-206ENST00000549139 CDK5RAP2Q96SN8 1893 aa19.06■□□□□ 0.64
CHMP1A-206ENST00000549139 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-206ENST00000549139 SPP2Q13103 211 aa19.06■□□□□ 0.64
CHMP1A-206ENST00000549139 PICALMQ13492 652 aa19.06■□□□□ 0.64
CHMP1A-206ENST00000549139 MAP3K21Q5TCX8 1036 aa19.06■□□□□ 0.64
CHMP1A-206ENST00000549139 TRIB2Q92519 343 aa19.06■□□□□ 0.64
CHMP1A-206ENST00000549139 FAM196BA6NMK8 535 aa19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 MAP3K12Q12852 859 aa19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 HAUS7Q99871 368 aa19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 OSBPL5Q9H0X9 879 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 ASCC2Q9H1I8 757 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 BOLA2Q9H3K6 86 aa19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 ECHDC1Q9NTX5 307 aa19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 ZBTB47Q9UFB7 747 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-206ENST00000549139 ATAD5Q96QE3 1844 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 IDH1O75874 414 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 HMGCS2P54868 508 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 PPP4CP60510 307 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 RRP1BQ14684 758 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 SH3D19Q5HYK7 790 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 ANKRD45Q5TZF3 282 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 ZNF280CQ8ND82 737 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 GPATCH3Q96I76 525 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 MORF4L1Q9UBU8 362 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 FOCADQ5VW36 1801 aa19.04■□□□□ 0.64
CHMP1A-206ENST00000549139 BAG3O95817 575 aa19.03■□□□□ 0.64
CHMP1A-206ENST00000549139 IGHDP01880 384 aa19.03■□□□□ 0.64
CHMP1A-206ENST00000549139 COL6A1P12109 1028 aa19.03■□□□□ 0.64
CHMP1A-206ENST00000549139 DNAJC2Q99543 621 aaKnown RBP19.03■□□□□ 0.64
CHMP1A-206ENST00000549139 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHMP1A-206ENST00000549139 COL2A1P02458 1487 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-206ENST00000549139 DNAH12Q6ZR08 3092 aa19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 GOLIM4O00461 696 aa19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 PLCG2P16885 1265 aa19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 CYP7A1P22680 504 aa19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 CAP2P40123 477 aa19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 PABPC4Q13310 644 aaKnown RBP eCLIP19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 COL25A1Q9BXS0 654 aaPredicted RBP19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 UBE2OQ9C0C9 1292 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 PAG1Q9NWQ8 432 aa19.02■□□□□ 0.64
CHMP1A-206ENST00000549139 SPTBN5Q9NRC6 3674 aaKnown RBP19.02■□□□□ 0.63
CHMP1A-206ENST00000549139 TTC41PQ6P2S7 1318 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms