RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 DNAJC21Q5F1R6 531 aaKnown RBP16.1■□□□□ 0.17
CACNB3-209ENST00000548860 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
CACNB3-209ENST00000548860 PPP2R2CQ9Y2T4 447 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 DEXIO95424 95 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 JADE2Q9NQC1 790 aa16.1■□□□□ 0.17
CACNB3-209ENST00000548860 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 C6orf229H3BNL8 230 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 TEX33O43247 280 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ZMYND10O75800 440 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 TRIM21P19474 475 aaKnown RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 TSGA10IPQ3SY00 556 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 RILPL1Q5EBL4 403 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 SYMPKQ92797 1274 aaKnown RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ENC1O14682 589 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 KRT18P05783 430 aaKnown RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 PTGDRQ13258 359 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ATL3Q6DD88 541 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 MAN1B1Q9UKM7 699 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ANKARQ7Z5J8 1434 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 MACROD2A1Z1Q3 448 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 AKR1B15C9JRZ8 316 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 CCDC175P0C221 793 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 TOGARAM2Q6ZUX3 1019 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ZSCAN29Q8IWY8 852 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ENGASEQ8NFI3 743 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ARFGAP3Q9NP61 516 aa16.09■□□□□ 0.17
CACNB3-209ENST00000548860 ZNHIT6Q9NWK9 470 aaKnown RBP16.09■□□□□ 0.17
CACNB3-209ENST00000548860 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.17
CACNB3-209ENST00000548860 KCNB2Q92953 911 aa16.08■□□□□ 0.17
CACNB3-209ENST00000548860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.08■□□□□ 0.17
CACNB3-209ENST00000548860 UBN2Q6ZU65 1347 aa16.08■□□□□ 0.17
CACNB3-209ENST00000548860 A0A1W2PQ27 194 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 A0A1W2PQ64 194 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 A0A1W2PQD8 194 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 ZBTB22O15209 634 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 TSPY3P0CV98 308 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 TSPY8P0CW00 308 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 IBSPP21815 317 aaPredicted RBP16.08■□□□□ 0.16
CACNB3-209ENST00000548860 TTC38Q5R3I4 469 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 NGLY1Q96IV0 654 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 KDM6AO15550 1401 aaPredicted RBP16.08■□□□□ 0.16
CACNB3-209ENST00000548860 MEGF6O75095 1541 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 ACRBPQ8NEB7 543 aa16.08■□□□□ 0.16
CACNB3-209ENST00000548860 MYO1BO43795 1136 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 SPECC1LQ69YQ0 1117 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 SYNRGQ9UMZ2 1314 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 KRT9P35527 623 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
CACNB3-209ENST00000548860 METTL16Q86W50 562 aaKnown RBP16.07■□□□□ 0.16
CACNB3-209ENST00000548860 UTYO14607 1347 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 TFRCP02786 760 aaKnown RBP16.07■□□□□ 0.16
CACNB3-209ENST00000548860 CASP14P31944 242 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 ASIC1P78348 528 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 STIM1Q13586 685 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 FAM98CQ17RN3 349 aaKnown RBP16.07■□□□□ 0.16
CACNB3-209ENST00000548860 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 VPS18Q9P253 973 aa16.07■□□□□ 0.16
CACNB3-209ENST00000548860 CIAO1O76071 339 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 TFAP4Q01664 338 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 TDRD12Q587J7 1177 aaKnown RBP16.06■□□□□ 0.16
CACNB3-209ENST00000548860 LY9Q9HBG7 655 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 ZNF652Q9Y2D9 606 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 RIPOR2Q9Y4F9 1068 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 CCDC66A2RUB6 948 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 KCNQ2O43526 872 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
CACNB3-209ENST00000548860 DYMQ7RTS9 669 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 C8orf37Q96NL8 207 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 FEZ1Q99689 392 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 SRRTQ9BXP5 876 aaKnown RBP16.06■□□□□ 0.16
CACNB3-209ENST00000548860 AKAP12Q02952 1782 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 EPS15P42566 896 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 CLCN6P51797 869 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
CACNB3-209ENST00000548860 CRNKL1Q9BZJ0 848 aaKnown RBP16.06■□□□□ 0.16
CACNB3-209ENST00000548860 MMRN2Q9H8L6 949 aa16.06■□□□□ 0.16
CACNB3-209ENST00000548860 SPATA31A3Q5VYP0 1347 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 CASP7P55210 303 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 RBM6P78332 1123 aaKnown RBP16.05■□□□□ 0.16
CACNB3-209ENST00000548860 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-209ENST00000548860 WDR24Q96S15 920 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 GPR108Q9NPR9 543 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 TBC1D7Q9P0N9 293 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 TFR2Q9UP52 801 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 PP2D1A8MPX8 630 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 NLRP3Q96P20 1036 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 EPB41L4AQ9HCS5 686 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-209ENST00000548860 VGLL3A8MV65 326 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 ANKRD65E5RJM6 399 aa16.05■□□□□ 0.16
CACNB3-209ENST00000548860 RBL2Q08999 1139 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms