RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 SOCS4Q8WXH5 440 aa11.68□□□□□ -0.54
GCN1-205ENST00000548821 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
GCN1-205ENST00000548821 PALD1Q9ULE6 856 aa11.68□□□□□ -0.54
GCN1-205ENST00000548821 TNNQ9UQP3 1299 aa11.68□□□□□ -0.54
GCN1-205ENST00000548821 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
GCN1-205ENST00000548821 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
GCN1-205ENST00000548821 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
GCN1-205ENST00000548821 SLC9C2Q5TAH2 1124 aa11.67□□□□□ -0.54
GCN1-205ENST00000548821 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
GCN1-205ENST00000548821 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
GCN1-205ENST00000548821 FEZ1Q99689 392 aa11.67□□□□□ -0.54
GCN1-205ENST00000548821 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
GCN1-205ENST00000548821 EXOC6BQ9Y2D4 811 aa11.67□□□□□ -0.54
GCN1-205ENST00000548821 USP17L15C9J2P7 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L13C9JLJ4 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L11C9JVI0 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L18D6R9N7 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L22D6RA61 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L17D6RBQ6 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L19D6RCP7 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L20D6RJB6 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 HMGCRP04035 888 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 USP17L24Q0WX57 530 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 MTMR2Q13614 643 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 ABCB5Q2M3G0 1257 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 TREML2Q5T2D2 321 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 TATDN1Q6P1N9 297 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 PANK1Q8TE04 598 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 U2AF1L4Q8WU68 220 aaKnown RBP11.66□□□□□ -0.54
GCN1-205ENST00000548821 SH2D4AQ9H788 454 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 HMX1Q9NP08 348 aaPredicted RBP11.66□□□□□ -0.54
GCN1-205ENST00000548821 PIH1D3Q9NQM4 214 aaKnown RBP11.66□□□□□ -0.54
GCN1-205ENST00000548821 MORF4L1Q9UBU8 362 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 SWAP70Q9UH65 585 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 ZBTB21Q9ULJ3 1066 aa11.66□□□□□ -0.54
GCN1-205ENST00000548821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
GCN1-205ENST00000548821 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
GCN1-205ENST00000548821 FAM196BA6NMK8 535 aa11.65□□□□□ -0.54
GCN1-205ENST00000548821 INHAP05111 366 aa11.65□□□□□ -0.54
GCN1-205ENST00000548821 RLBP1P12271 317 aa11.65□□□□□ -0.54
GCN1-205ENST00000548821 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.54
GCN1-205ENST00000548821 HABP4Q5JVS0 413 aaKnown RBP11.65□□□□□ -0.54
GCN1-205ENST00000548821 MIGA1Q8NAN2 632 aa11.65□□□□□ -0.54
GCN1-205ENST00000548821 ZBTB40Q9NUA8 1239 aa11.65□□□□□ -0.54
GCN1-205ENST00000548821 HOXC10Q9NYD6 342 aa11.65□□□□□ -0.54
GCN1-205ENST00000548821 SAP30BPQ9UHR5 308 aaKnown RBP11.65□□□□□ -0.54
GCN1-205ENST00000548821 DOCK2Q92608 1830 aa11.65□□□□□ -0.55
GCN1-205ENST00000548821 RPTORQ8N122 1335 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 FARP2O94887 1054 aaPredicted RBP11.64□□□□□ -0.55
GCN1-205ENST00000548821 CTGFP29279 349 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 HERVK_113P62684 666 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 CAP1Q01518 475 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 RAB3GAP1Q15042 981 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 MTFR1Q15390 333 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 NECAB2Q7Z6G3 386 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 ATP8A2Q9NTI2 1148 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 SLC5A4Q9NY91 659 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 GABRQQ9UN88 632 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 RABGAP1Q9Y3P9 1069 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 IVNS1ABPQ9Y6Y0 642 aa11.64□□□□□ -0.55
GCN1-205ENST00000548821 TNRC18O15417 2968 aaPredicted RBP11.63□□□□□ -0.55
GCN1-205ENST00000548821 EVI5O60447 810 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 GDF11O95390 407 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 GH2P01242 217 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 ATP5JP18859 108 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 RGS2P41220 211 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 DYNLL1P63167 89 aaKnown RBP11.63□□□□□ -0.55
GCN1-205ENST00000548821 ADGRA1Q86SQ6 560 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 C12orf42Q96LP6 360 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 CCDC17Q96LX7 622 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 DNAJC2Q99543 621 aaKnown RBP11.63□□□□□ -0.55
GCN1-205ENST00000548821 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
GCN1-205ENST00000548821 ZNF287Q9HBT7 754 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 PAG1Q9NWQ8 432 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
GCN1-205ENST00000548821 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
GCN1-205ENST00000548821 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
GCN1-205ENST00000548821 DOCK1Q14185 1865 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 APBB1O00213 710 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 GOLIM4O00461 696 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 MPHOSPH10O00566 681 aaKnown RBP11.62□□□□□ -0.55
GCN1-205ENST00000548821 ELNP15502 786 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 PDE6AP16499 860 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 ERVK-9P63128 1117 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 ERVK-24P63145 666 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 PLEKHH3Q7Z736 793 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 CCDC84Q86UT8 332 aaPredicted RBP11.62□□□□□ -0.55
GCN1-205ENST00000548821 DEFB118Q96PH6 123 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 UNC93B1Q9H1C4 597 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 ARHGEF10LQ9HCE6 1279 aa11.62□□□□□ -0.55
GCN1-205ENST00000548821 PAK6Q9NQU5 681 aaPredicted RBP11.62□□□□□ -0.55
GCN1-205ENST00000548821 TLR7Q9NYK1 1049 aaKnown RBP11.62□□□□□ -0.55
GCN1-205ENST00000548821 ZNF532Q9HCE3 1301 aa11.61□□□□□ -0.55
GCN1-205ENST00000548821 STRNO43815 780 aa11.61□□□□□ -0.55
GCN1-205ENST00000548821 ZKSCAN1P17029 563 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms