RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 POTEEQ6S8J3 1075 aa20.22■□□□□ 0.83
SSH1-208ENST00000548522 TMEM57Q8N5G2 664 aa20.22■□□□□ 0.83
SSH1-208ENST00000548522 NOL10Q9BSC4 688 aaKnown RBP20.22■□□□□ 0.83
SSH1-208ENST00000548522 C1orf115Q9H7X2 142 aa20.22■□□□□ 0.83
SSH1-208ENST00000548522 PIH1D3Q9NQM4 214 aaKnown RBP20.22■□□□□ 0.83
SSH1-208ENST00000548522 TLR7Q9NYK1 1049 aaKnown RBP20.22■□□□□ 0.83
SSH1-208ENST00000548522 HERVK_113P62684 666 aa20.21■□□□□ 0.83
SSH1-208ENST00000548522 DYNLL1P63167 89 aaKnown RBP20.21■□□□□ 0.83
SSH1-208ENST00000548522 POLA2Q14181 598 aa20.21■□□□□ 0.83
SSH1-208ENST00000548522 DHX36Q9H2U1 1008 aaKnown RBP20.21■□□□□ 0.83
SSH1-208ENST00000548522 HMX1Q9NP08 348 aaPredicted RBP20.21■□□□□ 0.83
SSH1-208ENST00000548522 ZBTB21Q9ULJ3 1066 aa20.21■□□□□ 0.83
SSH1-208ENST00000548522 RPTORQ8N122 1335 aa20.21■□□□□ 0.83
SSH1-208ENST00000548522 DDX60LQ5H9U9 1706 aaKnown RBP20.2■□□□□ 0.82
SSH1-208ENST00000548522 IPO8O15397 1037 aaKnown RBP20.2■□□□□ 0.82
SSH1-208ENST00000548522 BAG3O95817 575 aa20.2■□□□□ 0.82
SSH1-208ENST00000548522 ASNSP08243 561 aa20.2■□□□□ 0.82
SSH1-208ENST00000548522 PRKAR2AP13861 404 aaKnown RBP20.2■□□□□ 0.82
SSH1-208ENST00000548522 ZAP70P43403 619 aa20.2■□□□□ 0.82
SSH1-208ENST00000548522 PPP4CP60510 307 aa20.2■□□□□ 0.82
SSH1-208ENST00000548522 METTL16Q86W50 562 aaKnown RBP20.2■□□□□ 0.82
SSH1-208ENST00000548522 TMOD4Q9NZQ9 345 aa20.2■□□□□ 0.82
SSH1-208ENST00000548522 CDK5RAP2Q96SN8 1893 aa20.2■□□□□ 0.82
SSH1-208ENST00000548522 A0A1W2PPC1 479 aa20.19■□□□□ 0.82
SSH1-208ENST00000548522 SYN1P17600 705 aa20.19■□□□□ 0.82
SSH1-208ENST00000548522 HOXA7P31268 230 aaPredicted RBP20.19■□□□□ 0.82
SSH1-208ENST00000548522 MAP3K21Q5TCX8 1036 aa20.19■□□□□ 0.82
SSH1-208ENST00000548522 CRACR2BQ8N4Y2 399 aaPredicted RBP20.19■□□□□ 0.82
SSH1-208ENST00000548522 ANKLE1Q8NAG6 615 aa20.19■□□□□ 0.82
SSH1-208ENST00000548522 GDF15Q99988 308 aa20.19■□□□□ 0.82
SSH1-208ENST00000548522 PORCNQ9H237 461 aa20.19■□□□□ 0.82
SSH1-208ENST00000548522 RBPJLQ9UBG7 517 aa20.19■□□□□ 0.82
SSH1-208ENST00000548522 DBNLQ9UJU6 430 aaKnown RBP20.19■□□□□ 0.82
SSH1-208ENST00000548522 PLCG2P16885 1265 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 OS9Q13438 667 aaPredicted RBP20.18■□□□□ 0.82
SSH1-208ENST00000548522 Q3C1V9 767 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 GPRC5AQ8NFJ5 357 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 NBPF3Q9H094 633 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 GPR108Q9NPR9 543 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 EMILIN3Q9NT22 766 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 OGDHLQ9ULD0 1010 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 NDUFB9Q9Y6M9 179 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 PFASO15067 1338 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 FOCADQ5VW36 1801 aa20.18■□□□□ 0.82
SSH1-208ENST00000548522 USP17L10C9JJH3 530 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 CAPN2P17655 700 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 CCL14Q16627 93 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 CCDC158Q5M9N0 1113 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 MIGA1Q8NAN2 632 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 SSH3Q8TE77 659 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 PAGR1Q9BTK6 254 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 TRIM34Q9BYJ4 488 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 C11orf49Q9H6J7 331 aa20.17■□□□□ 0.82
SSH1-208ENST00000548522 MYO5AQ9Y4I1 1855 aaKnown RBP20.17■□□□□ 0.82
SSH1-208ENST00000548522 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
SSH1-208ENST00000548522 SURF6O75683 361 aaKnown RBP20.16■□□□□ 0.82
SSH1-208ENST00000548522 GH2P01242 217 aa20.16■□□□□ 0.82
SSH1-208ENST00000548522 ERVK-9P63128 1117 aa20.16■□□□□ 0.82
SSH1-208ENST00000548522 ERVK-24P63145 666 aa20.16■□□□□ 0.82
SSH1-208ENST00000548522 FOXP4Q8IVH2 680 aaPredicted RBP20.16■□□□□ 0.82
SSH1-208ENST00000548522 SOCS4Q8WXH5 440 aa20.16■□□□□ 0.82
SSH1-208ENST00000548522 NUDT12Q9BQG2 462 aa20.16■□□□□ 0.82
SSH1-208ENST00000548522 LAMA2P24043 3122 aaKnown RBP20.15■□□□□ 0.82
SSH1-208ENST00000548522 CYP7A1P22680 504 aa20.15■□□□□ 0.82
SSH1-208ENST00000548522 CCND3P30281 292 aaPredicted RBP20.15■□□□□ 0.82
SSH1-208ENST00000548522 CACNB2Q08289 660 aaPredicted RBP20.15■□□□□ 0.82
SSH1-208ENST00000548522 ZYXQ15942 572 aaKnown RBP20.15■□□□□ 0.82
SSH1-208ENST00000548522 GPR142Q7Z601 462 aa20.15■□□□□ 0.82
SSH1-208ENST00000548522 USP6NLQ92738 828 aa20.15■□□□□ 0.82
SSH1-208ENST00000548522 CCDC8Q9H0W5 538 aaPredicted RBP20.15■□□□□ 0.82
SSH1-208ENST00000548522 DNAH12Q6ZR08 3092 aa20.15■□□□□ 0.82
SSH1-208ENST00000548522 C19orf81C9J6K1 198 aa20.14■□□□□ 0.81
SSH1-208ENST00000548522 XRCC5P13010 732 aaKnown RBP20.14■□□□□ 0.81
SSH1-208ENST00000548522 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
SSH1-208ENST00000548522 MAGEA10P43363 369 aaPredicted RBP20.14■□□□□ 0.81
SSH1-208ENST00000548522 ATP8B2P98198 1209 aa20.14■□□□□ 0.81
SSH1-208ENST00000548522 ZNF512BQ96KM6 892 aaPredicted RBP20.14■□□□□ 0.81
SSH1-208ENST00000548522 CNMDO75829 334 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 IDH1O75874 414 aaKnown RBP20.13■□□□□ 0.81
SSH1-208ENST00000548522 HLA-DOAP06340 250 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 MAPK4P31152 587 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 BMP8BP34820 402 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 PDE3AQ14432 1141 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 MORN1Q5T089 497 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 ZKSCAN2Q63HK3 967 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 EAF2Q96CJ1 260 aaPredicted RBP20.13■□□□□ 0.81
SSH1-208ENST00000548522 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
SSH1-208ENST00000548522 RLBP1P12271 317 aa20.12■□□□□ 0.81
SSH1-208ENST00000548522 LHX8Q68G74 356 aa20.12■□□□□ 0.81
SSH1-208ENST00000548522 USP17L2Q6R6M4 530 aa20.12■□□□□ 0.81
SSH1-208ENST00000548522 Q7L0L9 218 aa20.12■□□□□ 0.81
SSH1-208ENST00000548522 MAGEB6Q8N7X4 407 aa20.12■□□□□ 0.81
SSH1-208ENST00000548522 GINM1Q9NU53 330 aa20.12■□□□□ 0.81
SSH1-208ENST00000548522 UNC80Q8N2C7 3258 aa20.12■□□□□ 0.81
SSH1-208ENST00000548522 COL6A1P12109 1028 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 RGS2P41220 211 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 EVX2Q03828 476 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 PLEKHH3Q7Z736 793 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 SLC17A8Q8NDX2 589 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 ACER1Q8TDN7 264 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms