RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 PLEKHH3Q7Z736 793 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 NSUN4Q96CB9 384 aaKnown RBP19.54■□□□□ 0.72
SVOP-202ENST00000548229 XAGE2Q96GT9 111 aa19.54■□□□□ 0.72
SVOP-202ENST00000548229 SPTBN5Q9NRC6 3674 aaKnown RBP19.54■□□□□ 0.72
SVOP-202ENST00000548229 ANP32CO43423 234 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 CCND3P30281 292 aaPredicted RBP19.53■□□□□ 0.72
SVOP-202ENST00000548229 CCNA1P78396 465 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 MORN1Q5T089 497 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 MFSD14CQ5VZR4 134 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 GPR142Q7Z601 462 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 TEX11Q8IYF3 940 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 TXNRD2Q9NNW7 524 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 RBPJLQ9UBG7 517 aa19.53■□□□□ 0.72
SVOP-202ENST00000548229 PA2G4Q9UQ80 394 aaKnown RBP19.53■□□□□ 0.72
SVOP-202ENST00000548229 BAG3O95817 575 aa19.52■□□□□ 0.72
SVOP-202ENST00000548229 PLCG2P16885 1265 aa19.52■□□□□ 0.72
SVOP-202ENST00000548229 RRP1BQ14684 758 aaKnown RBP19.52■□□□□ 0.72
SVOP-202ENST00000548229 GORABQ5T7V8 394 aa19.52■□□□□ 0.72
SVOP-202ENST00000548229 FOXP4Q8IVH2 680 aaPredicted RBP19.52■□□□□ 0.72
SVOP-202ENST00000548229 TRIM34Q9BYJ4 488 aa19.52■□□□□ 0.72
SVOP-202ENST00000548229 SENP6Q9GZR1 1112 aaPredicted RBP19.52■□□□□ 0.72
SVOP-202ENST00000548229 RAI14Q9P0K7 980 aa19.52■□□□□ 0.72
SVOP-202ENST00000548229 ATAD5Q96QE3 1844 aa19.52■□□□□ 0.72
SVOP-202ENST00000548229 E9PSI1 815 aa19.51■□□□□ 0.71
SVOP-202ENST00000548229 SPATA5Q8NB90 893 aa19.51■□□□□ 0.71
SVOP-202ENST00000548229 ZNF384Q8TF68 577 aa19.51■□□□□ 0.71
SVOP-202ENST00000548229 EDC3Q96F86 508 aaKnown RBP19.51■□□□□ 0.71
SVOP-202ENST00000548229 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
SVOP-202ENST00000548229 MAP2K5Q13163 448 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 Q3C1V9 767 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 CRACR2BQ8N4Y2 399 aaPredicted RBP19.5■□□□□ 0.71
SVOP-202ENST00000548229 FAM161BQ96MY7 647 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 NEUROD6Q96NK8 337 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 PORCNQ9H237 461 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 HMG20BQ9P0W2 317 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 LRP2BPQ9P2M1 347 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 RABGAP1Q9Y3P9 1069 aa19.5■□□□□ 0.71
SVOP-202ENST00000548229 TTC28Q96AY4 2481 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 CCL14Q16627 93 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 USP17L2Q6R6M4 530 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 ATF7IPQ6VMQ6 1270 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
SVOP-202ENST00000548229 FAM9BQ8IZU0 186 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 LPAR1Q92633 364 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 PAGR1Q9BTK6 254 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 SMC4Q9NTJ3 1288 aa19.49■□□□□ 0.71
SVOP-202ENST00000548229 CDH23Q9H251 3354 aa19.48■□□□□ 0.71
SVOP-202ENST00000548229 DNM1LO00429 736 aa19.48■□□□□ 0.71
SVOP-202ENST00000548229 SYMPKQ92797 1274 aaKnown RBP19.48■□□□□ 0.71
SVOP-202ENST00000548229 DDX20Q9UHI6 824 aaKnown RBP19.48■□□□□ 0.71
SVOP-202ENST00000548229 SLC15A5A6NIM6 579 aa19.47■□□□□ 0.71
SVOP-202ENST00000548229 IGSF3O75054 1194 aa19.47■□□□□ 0.71
SVOP-202ENST00000548229 TFCP2Q12800 502 aa19.47■□□□□ 0.71
SVOP-202ENST00000548229 TBC1D9Q6ZT07 1266 aa19.47■□□□□ 0.71
SVOP-202ENST00000548229 MAFAQ8NHW3 353 aaPredicted RBP19.47■□□□□ 0.71
SVOP-202ENST00000548229 SH3RF3Q8TEJ3 882 aaPredicted RBP19.47■□□□□ 0.71
SVOP-202ENST00000548229 CDX2Q99626 313 aaPredicted RBP19.47■□□□□ 0.71
SVOP-202ENST00000548229 PRDM6Q9NQX0 595 aa19.47■□□□□ 0.71
SVOP-202ENST00000548229 IVNS1ABPQ9Y6Y0 642 aa19.47■□□□□ 0.71
SVOP-202ENST00000548229 PEX10O60683 326 aa19.46■□□□□ 0.71
SVOP-202ENST00000548229 UQCRFS1P1P0C7P4 283 aa19.46■□□□□ 0.71
SVOP-202ENST00000548229 ARID4AP29374 1257 aaPredicted RBP19.46■□□□□ 0.71
SVOP-202ENST00000548229 CNGA1P29973 690 aa19.46■□□□□ 0.71
SVOP-202ENST00000548229 ATP2B2Q01814 1243 aa19.46■□□□□ 0.71
SVOP-202ENST00000548229 ARRDC4Q8NCT1 418 aa19.46■□□□□ 0.71
SVOP-202ENST00000548229 API5Q9BZZ5 524 aaKnown RBP19.46■□□□□ 0.71
SVOP-202ENST00000548229 SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
SVOP-202ENST00000548229 ZBTB21Q9ULJ3 1066 aa19.46■□□□□ 0.71
SVOP-202ENST00000548229 MUC3AQ02505 3323 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L15C9J2P7 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L13C9JLJ4 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L11C9JVI0 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L18D6R9N7 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L22D6RA61 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L17D6RBQ6 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L19D6RCP7 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L20D6RJB6 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 SRGAP3O43295 1099 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 HLA-DOAP06340 250 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 HOXC6P09630 235 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 ATN1P54259 1190 aaPredicted RBP19.45■□□□□ 0.7
SVOP-202ENST00000548229 PPP4CP60510 307 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 USP17L24Q0WX57 530 aa19.45■□□□□ 0.7
SVOP-202ENST00000548229 NAA16Q6N069 864 aaPredicted RBP19.45■□□□□ 0.7
SVOP-202ENST00000548229 AATFQ9NY61 560 aaKnown RBP eCLIP19.45■□□□□ 0.7
SVOP-202ENST00000548229 PTPREP23469 700 aa19.44■□□□□ 0.7
SVOP-202ENST00000548229 USP14P54578 494 aa19.44■□□□□ 0.7
SVOP-202ENST00000548229 RTP1P59025 263 aa19.44■□□□□ 0.7
SVOP-202ENST00000548229 SMAD3P84022 425 aaKnown RBP19.44■□□□□ 0.7
SVOP-202ENST00000548229 WDR78Q5VTH9 848 aa19.44■□□□□ 0.7
SVOP-202ENST00000548229 TGFBRAP1Q8WUH2 860 aa19.44■□□□□ 0.7
SVOP-202ENST00000548229 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
SVOP-202ENST00000548229 GNAI3P08754 354 aa19.43■□□□□ 0.7
SVOP-202ENST00000548229 PI16Q6UXB8 463 aa19.43■□□□□ 0.7
SVOP-202ENST00000548229 MAPKAPK5Q8IW41 473 aa19.43■□□□□ 0.7
SVOP-202ENST00000548229 C12orf42Q96LP6 360 aa19.43■□□□□ 0.7
SVOP-202ENST00000548229 FLT1P17948 1338 aa19.43■□□□□ 0.7
SVOP-202ENST00000548229 GDF11O95390 407 aa19.42■□□□□ 0.7
SVOP-202ENST00000548229 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
SVOP-202ENST00000548229 JAG1P78504 1218 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms