RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 CNTROBQ8N137 903 aa9.4□□□□□ -0.9
CCDC59-203ENST00000548126 WFDC12Q8WWY7 111 aa9.4□□□□□ -0.9
CCDC59-203ENST00000548126 GCC1Q96CN9 775 aa9.4□□□□□ -0.9
CCDC59-203ENST00000548126 COG3Q96JB2 828 aa9.4□□□□□ -0.9
CCDC59-203ENST00000548126 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.9
CCDC59-203ENST00000548126 USP42Q9H9J4 1324 aaKnown RBP9.39□□□□□ -0.91
CCDC59-203ENST00000548126 A6NJR5 290 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 H0YIN7 160 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 DKK1O94907 266 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 MAP2K2P36507 400 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 ARSDP51689 593 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 SOX10P56693 466 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 SLC51AQ86UW1 340 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 C2CD5Q86YS7 1000 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 TTC9Q92623 222 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 RNF112Q9ULX5 631 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
CCDC59-203ENST00000548126 RTL1A6NKG5 1358 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 KDRP35968 1356 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 DLEC1Q9Y238 1755 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 IDH3AP50213 366 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 RRS1Q15050 365 aaKnown RBP9.38□□□□□ -0.91
CCDC59-203ENST00000548126 CYP4F22Q6NT55 531 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 DHX32Q7L7V1 743 aaKnown RBP9.38□□□□□ -0.91
CCDC59-203ENST00000548126 TRPM4Q8TD43 1214 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
CCDC59-203ENST00000548126 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 RARAP10276 462 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 INPP5BP32019 993 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 IREB2P48200 963 aaKnown RBP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 GPLD1P80108 840 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 GRM1Q13255 1194 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 MAP1SQ66K74 1059 aaPredicted RBP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 LPIN3Q9BQK8 851 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 DDX21Q9NR30 783 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 TFIP11Q9UBB9 837 aaKnown RBP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 DMGDHQ9UI17 866 aaKnown RBP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 HACL1Q9UJ83 578 aa9.37□□□□□ -0.91
CCDC59-203ENST00000548126 AFDNP55196 1824 aaKnown RBP9.37□□□□□ -0.91
CCDC59-203ENST00000548126 HSP90AB2PQ58FF8 381 aa9.36□□□□□ -0.91
CCDC59-203ENST00000548126 HABP4Q5JVS0 413 aaKnown RBP9.36□□□□□ -0.91
CCDC59-203ENST00000548126 PERM1Q5SV97 790 aa9.36□□□□□ -0.91
CCDC59-203ENST00000548126 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
CCDC59-203ENST00000548126 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
CCDC59-203ENST00000548126 LTBP1Q14766 1721 aa9.36□□□□□ -0.91
CCDC59-203ENST00000548126 A0A1W2PP64 1363 aa9.36□□□□□ -0.91
CCDC59-203ENST00000548126 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
CCDC59-203ENST00000548126 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
CCDC59-203ENST00000548126 A0A0C4DFX4 3053 aa9.35□□□□□ -0.91
CCDC59-203ENST00000548126 AOC2O75106 756 aa9.35□□□□□ -0.91
CCDC59-203ENST00000548126 EPHX2P34913 555 aa9.35□□□□□ -0.91
CCDC59-203ENST00000548126 CRKLP46109 303 aaKnown RBP9.35□□□□□ -0.91
CCDC59-203ENST00000548126 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
CCDC59-203ENST00000548126 TAOK3Q9H2K8 898 aa9.35□□□□□ -0.91
CCDC59-203ENST00000548126 INSRP06213 1382 aa9.35□□□□□ -0.91
CCDC59-203ENST00000548126 ERVV-2B6SEH9 535 aa9.34□□□□□ -0.91
CCDC59-203ENST00000548126 SERPINB2P05120 415 aa9.34□□□□□ -0.91
CCDC59-203ENST00000548126 PHKG2P15735 406 aa9.34□□□□□ -0.91
CCDC59-203ENST00000548126 NOS3P29474 1203 aa9.34□□□□□ -0.91
CCDC59-203ENST00000548126 NFIXQ14938 502 aa9.34□□□□□ -0.91
CCDC59-203ENST00000548126 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
CCDC59-203ENST00000548126 GLMNQ92990 594 aa9.34□□□□□ -0.91
CCDC59-203ENST00000548126 ZNF622Q969S3 477 aaKnown RBP eCLIP9.34□□□□□ -0.913e-7■□□□□ 9.7
CCDC59-203ENST00000548126 SRA1Q9HD15 236 aaKnown RBP9.34□□□□□ -0.91
CCDC59-203ENST00000548126 NRXN2Q9P2S2 1712 aa9.34□□□□□ -0.92
CCDC59-203ENST00000548126 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
CCDC59-203ENST00000548126 NRLP54845 237 aa9.33□□□□□ -0.92
CCDC59-203ENST00000548126 DPYDQ12882 1025 aa9.33□□□□□ -0.92
CCDC59-203ENST00000548126 GRIK5Q16478 980 aa9.33□□□□□ -0.92
CCDC59-203ENST00000548126 CST9Q5W186 159 aa9.33□□□□□ -0.92
CCDC59-203ENST00000548126 SMG9Q9H0W8 520 aaKnown RBP9.33□□□□□ -0.92
CCDC59-203ENST00000548126 RBSNQ9H1K0 784 aa9.33□□□□□ -0.92
CCDC59-203ENST00000548126 KLK14Q9P0G3 267 aa9.33□□□□□ -0.92
CCDC59-203ENST00000548126 TRPM7Q96QT4 1865 aa9.32□□□□□ -0.92
CCDC59-203ENST00000548126 MICAL2O94851 1124 aa9.32□□□□□ -0.92
CCDC59-203ENST00000548126 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCDC59-203ENST00000548126 INTS5Q6P9B9 1019 aaKnown RBP9.32□□□□□ -0.92
CCDC59-203ENST00000548126 PRR23CQ6ZRP0 262 aa9.32□□□□□ -0.92
CCDC59-203ENST00000548126 MAP4K3Q8IVH8 894 aa9.32□□□□□ -0.92
CCDC59-203ENST00000548126 MRPL18Q9H0U6 180 aaKnown RBP9.32□□□□□ -0.92
CCDC59-203ENST00000548126 AKTIPQ9H8T0 292 aa9.32□□□□□ -0.92
CCDC59-203ENST00000548126 ZFATQ9P243 1243 aa9.32□□□□□ -0.92
CCDC59-203ENST00000548126 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 DLL1O00548 723 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 PTCD1O75127 700 aaKnown RBP9.31□□□□□ -0.92
CCDC59-203ENST00000548126 SASH3O75995 380 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 TARSP26639 723 aaKnown RBP9.31□□□□□ -0.92
CCDC59-203ENST00000548126 PTK7Q13308 1070 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 C11orf91Q3C1V1 193 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 ANKMY2Q8IV38 441 aa9.31□□□□□ -0.92
CCDC59-203ENST00000548126 CLUAP1Q96AJ1 413 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms