RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 GPR75-ASB3A0A0A6YYF3 556 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 A0A1B0GVL5 298 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 USP17L3A6NCW0 530 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 USP17L4A6NCW7 530 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 SPTLC2O15270 562 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 DEXIO95424 95 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 CCDC192P0DO97 292 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 CHRNA5P30532 468 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
RNF41-203ENST00000547967 USP17L1Q7RTZ2 530 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 PDGFDQ9GZP0 370 aaPredicted RBP13.64□□□□□ -0.23
RNF41-203ENST00000547967 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 CLSTN2Q9H4D0 955 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
RNF41-203ENST00000547967 PLCB2Q00722 1185 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 CCDC73Q6ZRK6 1079 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 PPP1R9BQ96SB3 815 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.63□□□□□ -0.23
RNF41-203ENST00000547967 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 NID2Q14112 1375 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 MYH15Q9Y2K3 1946 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 H0YIN7 160 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 SCNN1DP51172 638 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 PICALMQ13492 652 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 DIS3L2Q8IYB7 885 aaKnown RBP13.63□□□□□ -0.23
RNF41-203ENST00000547967 CERS5Q8N5B7 392 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
RNF41-203ENST00000547967 MMP1P03956 469 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 U2AF2P26368 475 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNF41-203ENST00000547967 RCAN1P53805 252 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 TYRO3Q06418 890 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 NR5A1Q13285 461 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 SNW1Q13573 536 aaKnown RBP13.62□□□□□ -0.23
RNF41-203ENST00000547967 SAFBQ15424 915 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNF41-203ENST00000547967 ADALQ6DHV7 355 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 RCSD1Q6JBY9 416 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 ZNF444Q8N0Y2 327 aaPredicted RBP13.62□□□□□ -0.23
RNF41-203ENST00000547967 KCNG4Q8TDN1 519 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 ERCC4Q92889 916 aaPredicted RBP13.62□□□□□ -0.23
RNF41-203ENST00000547967 VPS54Q9P1Q0 977 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 MAST2Q6P0Q8 1798 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 YEATS4O95619 227 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 TSPY3P0CV98 308 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 TSPY8P0CW00 308 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 ATP2B1P20020 1258 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 RHBDL3P58872 404 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 CTCFLQ8NI51 663 aaPredicted RBP13.62□□□□□ -0.23
RNF41-203ENST00000547967 OXER1Q8TDS5 423 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 USP25Q9UHP3 1055 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
RNF41-203ENST00000547967 DAGLAQ9Y4D2 1042 aa13.62□□□□□ -0.23
RNF41-203ENST00000547967 FLT1P17948 1338 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 FAM205AQ6ZU69 1335 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
RNF41-203ENST00000547967 NDUFA8P51970 172 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 NOSTRINQ8IVI9 506 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 SLF2Q8IX21 1173 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 CAMKK2Q96RR4 588 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 STX8Q9UNK0 236 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 CALM1P0DP23 149 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 CALM2P0DP24 149 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 CALM3P0DP25 149 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 FAM160A1Q05DH4 1040 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 FUT2Q10981 343 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 PPP2R5BQ15173 497 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 PKN1Q16512 942 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 SRBD1Q8N5C6 995 aaKnown RBP13.61□□□□□ -0.23
RNF41-203ENST00000547967 MRPS27Q92552 414 aaKnown RBP13.61□□□□□ -0.23
RNF41-203ENST00000547967 RNF26Q9BY78 433 aaPredicted RBP13.61□□□□□ -0.23
RNF41-203ENST00000547967 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
RNF41-203ENST00000547967 A0A087WWV3 80 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 WDHD1O75717 1129 aaPredicted RBP13.6□□□□□ -0.23
RNF41-203ENST00000547967 DDAH1O94760 285 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 PLCG2P16885 1265 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 SLC39A14Q15043 492 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 SASS6Q6UVJ0 657 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 ENGASEQ8NFI3 743 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 SHISA4Q96DD7 197 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
RNF41-203ENST00000547967 RRAGDQ9NQL2 400 aaPredicted RBP13.6□□□□□ -0.23
RNF41-203ENST00000547967 RBM28Q9NW13 759 aaKnown RBP13.6□□□□□ -0.23
RNF41-203ENST00000547967 IGSF3O75054 1194 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 ANO6Q4KMQ2 910 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 TMTC3Q6ZXV5 915 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 PNMA1Q8ND90 353 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 KIAA1551Q9HCM1 1747 aa13.6□□□□□ -0.23
RNF41-203ENST00000547967 VEGFAP15692 232 aaPredicted RBP13.59□□□□□ -0.23
RNF41-203ENST00000547967 RASA1P20936 1047 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 CDK8P49336 464 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 CLIC6Q96NY7 704 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 SDF4Q9BRK5 362 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 GAKO14976 1311 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 PRPF3O43395 683 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms