RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FASTKD5Q7L8L6 764 aaKnown RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 NBPF11Q86T75 865 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 TGFBRAP1Q8WUH2 860 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 OSBPL5Q9H0X9 879 aaPredicted RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 PIH1D3Q9NQM4 214 aaKnown RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 TLR7Q9NYK1 1049 aaKnown RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 DBNLQ9UJU6 430 aaKnown RBP8.2□□□□□ -1.1
SCAF11-211ENST00000547950 EXOC6BQ9Y2D4 811 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
SCAF11-211ENST00000547950 AKAP11Q9UKA4 1901 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 A0A0G2JLL6 359 aaPredicted RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 TBC1D12O60347 775 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 IDH1O75874 414 aaKnown RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 EN2P19622 333 aaPredicted RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 CYP7A1P22680 504 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 SPP2Q13103 211 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 SLC4A8Q2Y0W8 1093 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 PRRT2Q7Z6L0 340 aaPredicted RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 ADGRA1Q86SQ6 560 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 AACSQ86V21 672 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 MAPKAPK5Q8IW41 473 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 SH3TC2Q8TF17 1288 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 PTCD2Q8WV60 388 aaKnown RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 ARMC5Q96C12 935 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 ZNF512BQ96KM6 892 aaPredicted RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 PARK7Q99497 189 aaKnown RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 IL1RAPL2Q9NP60 686 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 RYDENQ9NUL5 291 aaKnown RBP8.19□□□□□ -1.1
SCAF11-211ENST00000547950 PI4KBQ9UBF8 816 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 NDUFB9Q9Y6M9 179 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 ATRNL1Q5VV63 1379 aa8.19□□□□□ -1.1
SCAF11-211ENST00000547950 GNRH1P01148 92 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 HOXD10P28358 340 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 CTGFP29279 349 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 PBX2P40425 430 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 PPP4CP60510 307 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 DYNLL1P63167 89 aaKnown RBP8.18□□□□□ -1.1
SCAF11-211ENST00000547950 RRP1BQ14684 758 aaKnown RBP8.18□□□□□ -1.1
SCAF11-211ENST00000547950 HSP90AB4PQ58FF6 505 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 POTEEQ6S8J3 1075 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 CRACR2BQ8N4Y2 399 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-211ENST00000547950 MIGA1Q8NAN2 632 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 RHPN1Q8TCX5 695 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 ZNF333Q96JL9 665 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 DHX36Q9H2U1 1008 aaKnown RBP8.18□□□□□ -1.1
SCAF11-211ENST00000547950 ANTXR1Q9H6X2 564 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 SAP30BPQ9UHR5 308 aaKnown RBP8.18□□□□□ -1.1
SCAF11-211ENST00000547950 RCAN3Q9UKA8 241 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 RFX7Q2KHR2 1363 aa8.18□□□□□ -1.1
SCAF11-211ENST00000547950 USP17L5A8MUK1 530 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 OSBPP22059 807 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 CAP2P40123 477 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 USP5P45974 858 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 FCGRTP55899 365 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 FOXP4Q8IVH2 680 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-211ENST00000547950 RPAP2Q8IXW5 612 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-211ENST00000547950 MAGEB6Q8N7X4 407 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 ZNF280CQ8ND82 737 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 RAET1EQ8TD07 263 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 SMCR8Q8TEV9 937 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-211ENST00000547950 ZBTB40Q9NUA8 1239 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 BIN2Q9UBW5 565 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-211ENST00000547950 SRRDQ9UH36 339 aa8.17□□□□□ -1.1
SCAF11-211ENST00000547950 HERC5Q9UII4 1024 aaKnown RBP8.17□□□□□ -1.1
SCAF11-211ENST00000547950 HMMRO75330 724 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 IFIT2P09913 472 aaKnown RBP8.16□□□□□ -1.1
SCAF11-211ENST00000547950 BCRP11274 1271 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 FLT1P17948 1338 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 HMGCS2P54868 508 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 PRMT2P55345 433 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 JAG1P78504 1218 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 TREML2Q5T2D2 321 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 SIRT2Q8IXJ6 389 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 CLASRPQ8N2M8 674 aaKnown RBP8.16□□□□□ -1.1
SCAF11-211ENST00000547950 ANKRD13CQ8N6S4 541 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 ADGRA2Q96PE1 1338 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 DDX19BQ9UMR2 479 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 GABRQQ9UN88 632 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 AGTPBP1Q9UPW5 1226 aa8.16□□□□□ -1.1
SCAF11-211ENST00000547950 ECM29Q5VYK3 1845 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 ARAP2Q8WZ64 1704 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 MYPNQ86TC9 1320 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 TNPO2O14787 897 aaKnown RBP8.15□□□□□ -1.1
SCAF11-211ENST00000547950 IGSF3O75054 1194 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 GDF11O95390 407 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 HLA-DOAP06340 250 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 GRK4P32298 578 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 PRKCZQ05513 592 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 MTFR1Q15390 333 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.1
SCAF11-211ENST00000547950 SLC9C2Q5TAH2 1124 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 C20orf194Q5TEA3 1177 aa8.15□□□□□ -1.1
SCAF11-211ENST00000547950 PRPF38BQ5VTL8 546 aaKnown RBP8.15□□□□□ -1.1
SCAF11-211ENST00000547950 KIF1BPQ96EK5 621 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms