RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 LLGL2Q6P1M3 1020 aa4.81□□□□□ -1.64
DEPDC4-204ENST00000547823 EPS8L3Q8TE67 593 aaKnown RBP4.81□□□□□ -1.64
DEPDC4-204ENST00000547823 ELMO3Q96BJ8 720 aa4.81□□□□□ -1.64
DEPDC4-204ENST00000547823 NECAB3Q96P71 396 aaPredicted RBP4.81□□□□□ -1.64
DEPDC4-204ENST00000547823 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
DEPDC4-204ENST00000547823 BCO2Q9BYV7 579 aa4.81□□□□□ -1.64
DEPDC4-204ENST00000547823 H3BS24 57 aa4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 IGHA2P01877 340 aa4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 GSTT1P30711 240 aa4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 STK35Q8TDR2 534 aa4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 ANKRD24Q8TF21 1146 aa4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 MYLIPQ8WY64 445 aa4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 SMG5Q9UPR3 1016 aaKnown RBP4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 CAPN6Q9Y6Q1 641 aa4.8□□□□□ -1.64
DEPDC4-204ENST00000547823 DCDC2CA8MYV0 355 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 ETV2O00321 342 aaPredicted RBP4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 SEMA7AO75326 666 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 SLITRK5O94991 958 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 CDKAL1Q5VV42 579 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 TTC6Q86TZ1 520 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 IRF2BP1Q8IU81 584 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 PIWIL2Q8TC59 973 aaKnown RBP4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 KCNN1Q92952 543 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 RELTQ969Z4 430 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 MIPEPQ99797 713 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 SLAMF8Q9P0V8 285 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 TMEM59LQ9UK28 342 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 PCDHA4Q9UN74 947 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 CYP8B1Q9UNU6 501 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 ST14Q9Y5Y6 855 aa4.79□□□□□ -1.64
DEPDC4-204ENST00000547823 HPXP02790 462 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 HOXA5P20719 270 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 SERPINB4P48594 390 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 FGD1P98174 961 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 DBX2Q6ZNG2 339 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 HDXQ7Z353 690 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 C12orf40Q86WS4 652 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 TMEM151BQ8IW70 566 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 LILRA2Q8N149 483 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 BORCS6Q96GS4 357 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 SLC6A17Q9H1V8 727 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 PARD6AQ9NPB6 346 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 CSADQ9Y600 493 aa4.78□□□□□ -1.64
DEPDC4-204ENST00000547823 RFXAPO00287 272 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 GIPC1O14908 333 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 BMP6P22004 513 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 ERICH6BQ5W0A0 696 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 LETMD1Q6P1Q0 360 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 UBE3DQ7Z6J8 389 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 HID1Q8IV36 788 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 FBF1Q8TES7 1133 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 UBE2FQ969M7 185 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 WNT10AQ9GZT5 417 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 TRIT1Q9H3H1 467 aaKnown RBP4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 MYO15BQ96JP2 1530 aa4.77□□□□□ -1.65
DEPDC4-204ENST00000547823 PRR33A8MZF0 331 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 ENC1O14682 589 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 PEX10O60683 326 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 ETV3P41162 512 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 CCDC82Q8N4S0 544 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 OXR1Q8N573 874 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 C3orf58Q8NDZ4 430 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 SYTL4Q96C24 671 aaPredicted RBP4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 CWC22Q9HCG8 908 aaKnown RBP4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 TACC3Q9Y6A5 838 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 SNCAIPQ9Y6H5 919 aa4.76□□□□□ -1.65
DEPDC4-204ENST00000547823 ERCC6Q03468 1493 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 PRAMEF27A3QJZ7 478 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 CST3P01034 146 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 SYN1P17600 705 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 SLBPQ14493 270 aaKnown RBP eCLIP4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 ZNF385BQ569K4 471 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 NXPE4Q6UWF7 544 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 TPTE2Q6XPS3 522 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 PDZD8Q8NEN9 1154 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 BAHD1Q8TBE0 780 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 GRIN3AQ8TCU5 1115 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 DHX38Q92620 1227 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 ZCCHC4Q9H5U6 513 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 ZSWIM5Q9P217 1185 aa4.75□□□□□ -1.65
DEPDC4-204ENST00000547823 FITM1A5D6W6 292 aa4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 CBX7O95931 251 aa4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 ETF1P62495 437 aaKnown RBP4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 PDE4CQ08493 712 aa4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 TCERG1LQ5VWI1 586 aa4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 IRF2BPLQ9H1B7 796 aa4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 JAG2Q9Y219 1238 aa4.74□□□□□ -1.65
DEPDC4-204ENST00000547823 DNAJC25-GNG10A0A024R161 153 aa4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 HK2P52789 917 aa4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 DLG4P78352 724 aa4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 NR0B2Q15466 257 aa4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 ENOX2Q16206 610 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 LRFN4Q6PJG9 635 aa4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 PI16Q6UXB8 463 aa4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 GPATCH2Q9NW75 528 aa4.73□□□□□ -1.65
DEPDC4-204ENST00000547823 PNMA6FA0A0J9YX94 578 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 TEX51A0A1B0GUA7 166 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 ARID3CA6NKF2 412 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 FOXD2O60548 495 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms