RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 LRSAM1Q6UWE0 723 aa19.36■□□□□ 0.69
CHMP1A-204ENST00000547687 FERMT3Q86UX7 667 aa19.36■□□□□ 0.69
CHMP1A-204ENST00000547687 TBC1D10CQ8IV04 446 aa19.36■□□□□ 0.69
CHMP1A-204ENST00000547687 SMARCC2Q8TAQ2 1214 aa19.36■□□□□ 0.69
CHMP1A-204ENST00000547687 FZD1Q9UP38 647 aa19.36■□□□□ 0.69
CHMP1A-204ENST00000547687 PRKG1Q13976 671 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 TMED8Q6PL24 325 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 NCOA7Q8NI08 942 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 DDX11Q96FC9 970 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 VEZTQ9HBM0 779 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 PDIA3P30101 505 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 MCM5P33992 734 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 NASPP49321 788 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 C2orf69Q8N8R5 385 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 FAM184AQ8NB25 1140 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 NAP1L2Q9ULW6 460 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 TCHHQ07283 1943 aa19.35■□□□□ 0.69
CHMP1A-204ENST00000547687 IGSF3O75054 1194 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 CCT2P78371 535 aaKnown RBP19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 DIXDC1Q155Q3 683 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 MB21D2Q8IYB1 491 aaPredicted RBP19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 NSUN7Q8NE18 718 aaKnown RBP19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 CHMP4CQ96CF2 233 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 ZIC5Q96T25 663 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 BAZ2AQ9UIF9 1905 aaKnown RBP19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 MYH2Q9UKX2 1941 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 PRC1O43663 620 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 EVCP57679 992 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 KRT85P78386 507 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 CTDSPL2Q05D32 466 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 RALYLQ86SE5 291 aaKnown RBP19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 MTMR14Q8NCE2 650 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 RBSNQ9H1K0 784 aa19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 TDRD3Q9H7E2 651 aaKnown RBP19.34■□□□□ 0.69
CHMP1A-204ENST00000547687 CTDNEP1O95476 244 aa19.33■□□□□ 0.68
CHMP1A-204ENST00000547687 CRKP46108 304 aa19.33■□□□□ 0.68
CHMP1A-204ENST00000547687 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-204ENST00000547687 TBC1D22AQ8WUA7 517 aa19.33■□□□□ 0.68
CHMP1A-204ENST00000547687 INCENPQ9NQS7 918 aa19.33■□□□□ 0.68
CHMP1A-204ENST00000547687 H3BQV1 296 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 MMP14P50281 582 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 GSTO1P78417 241 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 TRDNQ13061 729 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 IFFO2Q5TF58 517 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 NKX2-3Q8TAU0 364 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 DEFB129Q9H1M3 183 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 TTLL12Q14166 644 aaPredicted RBP19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 TPRNQ4KMQ1 711 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 APOBEC3FQ8IUX4 373 aaKnown RBP19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 NCOA5Q9HCD5 579 aaKnown RBP19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 GPHNQ9NQX3 736 aaPredicted RBP19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 SERPINA10Q9UK55 444 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 TACC3Q9Y6A5 838 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 THSD7BQ9C0I4 1608 aa19.32■□□□□ 0.68
CHMP1A-204ENST00000547687 PAPPA2Q9BXP8 1791 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 PTPDC1A2A3K4 754 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 UBE2Q2LH0YL09 131 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 FOXN1O15353 648 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 MYO1BO43795 1136 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 ECE1P42892 770 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 CACNB3P54284 484 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 ANTXR2P58335 489 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 FAM173BQ6P4H8 233 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 CRNKL1Q9BZJ0 848 aaKnown RBP19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 KIF3AQ9Y496 699 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 NEDD4P46934 1319 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 WDR19Q8NEZ3 1342 aa19.31■□□□□ 0.68
CHMP1A-204ENST00000547687 CCDC183Q5T5S1 534 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 ANP32BQ92688 251 aaKnown RBP19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 ZNF70Q9UC06 446 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 MINDY4BA8MYZ0 360 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 B4E1Z4 1266 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 LDHCP07864 332 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 ZNF157P51786 506 aaPredicted RBP19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 PPARAQ07869 468 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 AKNAD1Q5T1N1 836 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 RGMBQ6NW40 437 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 MROH7-TTC4A0A0A0MT08 1334 aa19.3■□□□□ 0.68
CHMP1A-204ENST00000547687 TCP10L2B9ZVM9 353 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 SMIM22K7EJ46 135 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 GIMAP6Q6P9H5 292 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 CYB5R4Q7L1T6 521 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 CDAN1Q8IWY9 1227 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 STK11IPQ8N1F8 1099 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 ZSCAN16Q9H4T2 348 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 RTN4Q9NQC3 1192 aaKnown RBP19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 WBP1LQ9NX94 342 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 RESTQ13127 1097 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 SPDYE2Q495Y8 402 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 COL13A1Q5TAT6 717 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 MFSD6Q6ZSS7 791 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 TTC6Q86TZ1 520 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 SCAND2PQ9GZW5 306 aaPredicted RBP19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 TSKSQ9UJT2 592 aa19.29■□□□□ 0.68
CHMP1A-204ENST00000547687 SSC5DA1L4H1 1573 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 CYP2D7A0A087X1C5 515 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 KLF18A0A0U1RQI7 1052 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms