RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 RESTQ13127 1097 aa15.61■□□□□ 0.09
PTCH1-215ENST00000547672 FAM177A1Q8N128 213 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-215ENST00000547672 CRACR2BQ8N4Y2 399 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-215ENST00000547672 OGFOD1Q8N543 542 aa15.61■□□□□ 0.09
PTCH1-215ENST00000547672 CERS5Q8N5B7 392 aa15.61■□□□□ 0.09
PTCH1-215ENST00000547672 NUP133Q8WUM0 1156 aa15.61■□□□□ 0.09
PTCH1-215ENST00000547672 SPATA32Q96LK8 384 aa15.61■□□□□ 0.09
PTCH1-215ENST00000547672 RNF26Q9BY78 433 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-215ENST00000547672 TACC3Q9Y6A5 838 aa15.61■□□□□ 0.09
PTCH1-215ENST00000547672 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
PTCH1-215ENST00000547672 PRDM1O75626 825 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 CYP2D6P10635 497 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 KCNA3P22001 575 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 CDK8P49336 464 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 RBM5P52756 815 aaKnown RBP eCLIP15.6■□□□□ 0.09
PTCH1-215ENST00000547672 GNL2Q13823 731 aaKnown RBP15.6■□□□□ 0.09
PTCH1-215ENST00000547672 NTRK3Q16288 839 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 SLC51AQ86UW1 340 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 FERMT3Q86UX7 667 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 NEDD1Q8NHV4 660 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 CCDC17Q96LX7 622 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 TMOD2Q9NZR1 351 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 SAP30BPQ9UHR5 308 aaKnown RBP15.6■□□□□ 0.09
PTCH1-215ENST00000547672 CNPY2Q9Y2B0 182 aa15.6■□□□□ 0.09
PTCH1-215ENST00000547672 NAV1Q8NEY1 1877 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 GOLGA6L3A6NEY3 463 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 PRPF3O43395 683 aaKnown RBP15.59■□□□□ 0.09
PTCH1-215ENST00000547672 ZBTB7AO95365 584 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 CDC27P30260 824 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
PTCH1-215ENST00000547672 APOBEC3HQ6NTF7 200 aaKnown RBP15.59■□□□□ 0.09
PTCH1-215ENST00000547672 CDC42EP5Q6NZY7 148 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 FOXP4Q8IVH2 680 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-215ENST00000547672 IDI2Q9BXS1 227 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 SLC26A6Q9BXS9 759 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 PDGFDQ9GZP0 370 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-215ENST00000547672 EHD4Q9H223 541 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 FAM217BQ9NTX9 383 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-215ENST00000547672 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
PTCH1-215ENST00000547672 FIBPO43427 364 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 VIL1P09327 827 aaKnown RBP15.58■□□□□ 0.08
PTCH1-215ENST00000547672 SCNN1DP51172 638 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 PLCD1P51178 756 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 TROAPQ12815 778 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 TNIP1Q15025 636 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 FOXD4L6Q3SYB3 417 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-215ENST00000547672 FAM47AQ5JRC9 791 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 RSBN1LQ6PCB5 846 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-215ENST00000547672 FOXD4L3Q6VB84 417 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-215ENST00000547672 KIAA0825Q8IV33 1275 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 AGBL3Q8NEM8 1001 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 JDP2Q8WYK2 163 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 TRIM34Q9BYJ4 488 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 GZF1Q9H116 711 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-215ENST00000547672 SERPINB13Q9UIV8 391 aa15.58■□□□□ 0.08
PTCH1-215ENST00000547672 ATF5Q9Y2D1 282 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-215ENST00000547672 ENTPD3O75355 529 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 RASA1P20936 1047 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 SMARCA1P28370 1054 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 CCDC144CPQ8IYA2 1237 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-215ENST00000547672 OSBPL5Q9H0X9 879 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-215ENST00000547672 SENP2Q9HC62 589 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 BRMS1Q9HCU9 246 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 PI4KBQ9UBF8 816 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 RCOR1Q9UKL0 485 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 SNED1Q8TER0 1413 aa15.57■□□□□ 0.08
PTCH1-215ENST00000547672 MYH1P12882 1939 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 WDHD1O75717 1129 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-215ENST00000547672 TOP1P11387 765 aaKnown RBP15.56■□□□□ 0.08
PTCH1-215ENST00000547672 ZNF445P59923 1031 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 PICALMQ13492 652 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 KRT40Q6A162 431 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 CAVIN1Q6NZI2 390 aaKnown RBP15.56■□□□□ 0.08
PTCH1-215ENST00000547672 JMYQ8N9B5 988 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 PNMA1Q8ND90 353 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 DYNLL2Q96FJ2 89 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 MYL10Q9BUA6 226 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 FOCADQ5VW36 1801 aa15.56■□□□□ 0.08
PTCH1-215ENST00000547672 MYO1BO43795 1136 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 YEATS4O95619 227 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 RXRAP19793 462 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 R3HDM1Q15032 1099 aaKnown RBP15.55■□□□□ 0.08
PTCH1-215ENST00000547672 FKBP1CQ5VVH2 108 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 TMTC3Q6ZXV5 915 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 RAB11FIP4Q86YS3 637 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 GPT2Q8TD30 523 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 KCNG4Q8TDN1 519 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 LEO1Q8WVC0 666 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-215ENST00000547672 PHKBQ93100 1093 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 TAOK3Q9H2K8 898 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 FOXP1Q9H334 677 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-215ENST00000547672 RTEL1Q9NZ71 1219 aa15.55■□□□□ 0.08
PTCH1-215ENST00000547672 LTBP3Q9NS15 1303 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 U2AF2P26368 475 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTCH1-215ENST00000547672 MRE11P49959 708 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 GABPAQ06546 454 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 DLGAP5Q15398 846 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 SF3A1Q15459 793 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms