RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 FHOD1Q9Y613 1164 aa14.77□□□□□ -0.05
BRF1-210ENST00000547374 TNKSO95271 1327 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 MATR3P43243 847 aaKnown RBP eCLIP14.76□□□□□ -0.05
BRF1-210ENST00000547374 PLA2G4AP47712 749 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 GPS2Q13227 327 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 PUM3Q15397 648 aaKnown RBP14.76□□□□□ -0.05
BRF1-210ENST00000547374 ISCA1Q9BUE6 129 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 BTG4Q9NY30 223 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 PARP3Q9Y6F1 533 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 FANCGO15287 622 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 RAD21O60216 631 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 PPP6R2O75170 966 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 MMP1P03956 469 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 CHMP4BP1P59074 171 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 TSR1Q2NL82 804 aaKnown RBP14.76□□□□□ -0.05
BRF1-210ENST00000547374 TRIM65Q6PJ69 517 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 GIGYF2Q6Y7W6 1299 aaKnown RBP14.76□□□□□ -0.05
BRF1-210ENST00000547374 CADPS2Q86UW7 1296 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 KRT23Q9C075 422 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 SRCAPQ6ZRS2 3230 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 RILPL1Q5EBL4 403 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 CAGE1Q8TC20 777 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 PSMB7Q99436 277 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 BRMS1Q9HCU9 246 aa14.76□□□□□ -0.05
BRF1-210ENST00000547374 FAM217BQ9NTX9 383 aaPredicted RBP14.76□□□□□ -0.05
BRF1-210ENST00000547374 SYNRGQ9UMZ2 1314 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 ENOX2Q16206 610 aaKnown RBP14.75□□□□□ -0.05
BRF1-210ENST00000547374 TC2NQ8N9U0 490 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 GOLGA1Q92805 767 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 NIP7Q9Y221 180 aaKnown RBP eCLIP14.75□□□□□ -0.05
BRF1-210ENST00000547374 JCADQ9P266 1359 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 NFAT5O94916 1531 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 CCDC196A0A1B0GTZ2 297 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 UQCRFS1P1P0C7P4 283 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 EARS2Q5JPH6 523 aaKnown RBP14.75□□□□□ -0.05
BRF1-210ENST00000547374 CATIPQ7Z7H3 387 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 MAP3K14Q99558 947 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 VAT1LQ9HCJ6 419 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 TUBE1Q9UJT0 475 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 TADA3O75528 432 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 ABL1P00519 1130 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 EVX2Q03828 476 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 C10orf67Q8IYJ2 551 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 ANKRD20A12PQ8NF67 263 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 LPIN2Q92539 896 aa14.75□□□□□ -0.05
BRF1-210ENST00000547374 GSG1L2A8MUP6 293 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 ERVV-2B6SEH9 535 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 DEXIO95424 95 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 ADAMTS2O95450 1211 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 HSP90B2PQ58FF3 399 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 SLC35F6Q8N357 371 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 MLKLQ8NB16 471 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 CEP131Q9UPN4 1083 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 PTGDRQ13258 359 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 L2HGDHQ9H9P8 463 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 TFCP2L1Q9NZI6 479 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 SLIT1O75093 1534 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 TUBGCP6Q96RT7 1819 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 EFCAB8A8MWE9 144 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 PDE8AO60658 829 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 UBXN1Q04323 297 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 UBE3CQ15386 1083 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 NTRK3Q16288 839 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 RGS22Q8NE09 1264 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 GPKOWQ92917 476 aaPredicted RBP eCLIP14.74□□□□□ -0.05
BRF1-210ENST00000547374 PDE11AQ9HCR9 933 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 MAP3K15Q6ZN16 1313 aa14.74□□□□□ -0.05
BRF1-210ENST00000547374 SASH3O75995 380 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 FMNL1O95466 1100 aaPredicted RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 EIF5P55010 431 aaKnown RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 PPARAQ07869 468 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 RAD9BQ6WBX8 426 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 IQCA1Q86XH1 822 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 CRACR2BQ8N4Y2 399 aaPredicted RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 ESR2Q92731 530 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 TACC3Q9Y6A5 838 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 MAGEB6P1A0A0J9YX57 407 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 H2AFXP16104 143 aaPredicted RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 KRT9P35527 623 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 NAP1L1P55209 391 aaKnown RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 TRIM10Q9UDY6 481 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 LRRC37A3O60309 1634 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 USP17L12C9JPN9 530 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 USP17L21D6R901 530 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 KRT2P35908 639 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 NCAPH2Q6IBW4 605 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 BPIFA3Q9BQP9 254 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 CNNM2Q9H8M5 875 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
BRF1-210ENST00000547374 CALCOCO1Q9P1Z2 691 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 FBXO2Q9UK22 296 aaPredicted RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 HPSEQ9Y251 543 aa14.73□□□□□ -0.05
BRF1-210ENST00000547374 SOS2Q07890 1332 aaPredicted RBP14.73□□□□□ -0.05
BRF1-210ENST00000547374 TSPY2A6NKD2 308 aa14.72□□□□□ -0.05
BRF1-210ENST00000547374 WNT7AO00755 349 aa14.72□□□□□ -0.05
BRF1-210ENST00000547374 IFNAR1P17181 557 aa14.72□□□□□ -0.05
BRF1-210ENST00000547374 PTPREP23469 700 aa14.72□□□□□ -0.05
BRF1-210ENST00000547374 CTCFLQ8NI51 663 aaPredicted RBP14.72□□□□□ -0.05
BRF1-210ENST00000547374 TEX13AQ9BXU3 409 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms