RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PPP1R16BQ96T49 567 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 WNT10AQ9GZT5 417 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 CAPN6Q9Y6Q1 641 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 PRAMEF27A3QJZ7 478 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
CCDC38-204ENST00000546816 KRT1P04264 644 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 CDKAL1Q5VV42 579 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 ALG1LQ6GMV1 187 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 MFSD2AQ8NA29 543 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 RIN3Q8TB24 985 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 TOX2Q96NM4 488 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 MIPEPQ99797 713 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 WWC3Q9ULE0 1092 aa8.12□□□□□ -1.11
CCDC38-204ENST00000546816 H3BS24 57 aa8.11□□□□□ -1.11
CCDC38-204ENST00000546816 FGD1P98174 961 aa8.11□□□□□ -1.11
CCDC38-204ENST00000546816 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
CCDC38-204ENST00000546816 SYDE1Q6ZW31 735 aaPredicted RBP8.11□□□□□ -1.11
CCDC38-204ENST00000546816 HDXQ7Z353 690 aa8.11□□□□□ -1.11
CCDC38-204ENST00000546816 TPX2Q9ULW0 747 aaKnown RBP8.11□□□□□ -1.11
CCDC38-204ENST00000546816 MPZL3Q6UWV2 235 aa8.1□□□□□ -1.11
CCDC38-204ENST00000546816 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
CCDC38-204ENST00000546816 THAP5Q7Z6K1 395 aa8.1□□□□□ -1.11
CCDC38-204ENST00000546816 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
CCDC38-204ENST00000546816 SNCAIPQ9Y6H5 919 aa8.1□□□□□ -1.11
CCDC38-204ENST00000546816 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
CCDC38-204ENST00000546816 CDK8P49336 464 aa8.09□□□□□ -1.11
CCDC38-204ENST00000546816 LETMD1Q6P1Q0 360 aa8.09□□□□□ -1.11
CCDC38-204ENST00000546816 SV2BQ7L1I2 683 aa8.09□□□□□ -1.11
CCDC38-204ENST00000546816 HID1Q8IV36 788 aa8.09□□□□□ -1.11
CCDC38-204ENST00000546816 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
CCDC38-204ENST00000546816 CST3P01034 146 aaPredicted RBP8.08□□□□□ -1.12
CCDC38-204ENST00000546816 USP17L7P0C7H9 530 aa8.08□□□□□ -1.12
CCDC38-204ENST00000546816 ANKLE2Q86XL3 938 aa8.08□□□□□ -1.12
CCDC38-204ENST00000546816 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
CCDC38-204ENST00000546816 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
CCDC38-204ENST00000546816 ALPK1Q96QP1 1244 aa8.08□□□□□ -1.12
CCDC38-204ENST00000546816 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
CCDC38-204ENST00000546816 C1QTNF9P0C862 333 aa8.07□□□□□ -1.12
CCDC38-204ENST00000546816 ETF1P62495 437 aaKnown RBP8.07□□□□□ -1.12
CCDC38-204ENST00000546816 WIPI1Q5MNZ9 446 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-204ENST00000546816 ZNF746Q6NUN9 644 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-204ENST00000546816 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
CCDC38-204ENST00000546816 ZSCAN29Q8IWY8 852 aaPredicted RBP8.07□□□□□ -1.12
CCDC38-204ENST00000546816 CCDC120Q96HB5 630 aa8.07□□□□□ -1.12
CCDC38-204ENST00000546816 PRAMEF13Q5VWM6 474 aa8.06□□□□□ -1.12
CCDC38-204ENST00000546816 FBXO15Q8NCQ5 510 aaPredicted RBP8.06□□□□□ -1.12
CCDC38-204ENST00000546816 ZSCAN18Q8TBC5 510 aaPredicted RBP8.06□□□□□ -1.12
CCDC38-204ENST00000546816 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
CCDC38-204ENST00000546816 COX4I2Q96KJ9 171 aa8.06□□□□□ -1.12
CCDC38-204ENST00000546816 GFRA2O00451 464 aa8.05□□□□□ -1.12
CCDC38-204ENST00000546816 CBX7O95931 251 aa8.05□□□□□ -1.12
CCDC38-204ENST00000546816 KIR3DL1P43629 444 aa8.05□□□□□ -1.12
CCDC38-204ENST00000546816 TNK2Q07912 1038 aa8.05□□□□□ -1.12
CCDC38-204ENST00000546816 TTBK2Q6IQ55 1244 aa8.05□□□□□ -1.12
CCDC38-204ENST00000546816 DIRC2Q96SL1 478 aa8.05□□□□□ -1.12
CCDC38-204ENST00000546816 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
CCDC38-204ENST00000546816 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
CCDC38-204ENST00000546816 ESR1P03372 595 aa8.04□□□□□ -1.12
CCDC38-204ENST00000546816 GRK4P32298 578 aa8.04□□□□□ -1.12
CCDC38-204ENST00000546816 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
CCDC38-204ENST00000546816 ZSWIM5Q9P217 1185 aa8.04□□□□□ -1.12
CCDC38-204ENST00000546816 TACC3Q9Y6A5 838 aa8.04□□□□□ -1.12
CCDC38-204ENST00000546816 CYP7A1P22680 504 aa8.03□□□□□ -1.12
CCDC38-204ENST00000546816 RPS26P62854 115 aaKnown RBP8.03□□□□□ -1.12
CCDC38-204ENST00000546816 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
CCDC38-204ENST00000546816 XAGE3Q8WTP9 111 aa8.03□□□□□ -1.12
CCDC38-204ENST00000546816 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
CCDC38-204ENST00000546816 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
CCDC38-204ENST00000546816 DNAJC25-GNG10A0A024R161 153 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 NFIBO00712 420 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 ZSCAN22P10073 491 aaPredicted RBP8.02□□□□□ -1.13
CCDC38-204ENST00000546816 RALGPS1Q5JS13 557 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 CDH24Q86UP0 819 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 ABHD4Q8TB40 342 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 KRTAP4-11Q9BYQ6 195 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 KCNK12Q9HB15 430 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 TJP2Q9UDY2 1190 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 PCDHB5Q9Y5E4 795 aa8.02□□□□□ -1.13
CCDC38-204ENST00000546816 P4HBP07237 508 aaKnown RBP8.01□□□□□ -1.13
CCDC38-204ENST00000546816 KCNA1Q09470 495 aa8.01□□□□□ -1.13
CCDC38-204ENST00000546816 TMPRSS7Q7RTY8 843 aa8.01□□□□□ -1.13
CCDC38-204ENST00000546816 AMIGO3Q86WK7 504 aa8.01□□□□□ -1.13
CCDC38-204ENST00000546816 MRPL41Q8IXM3 137 aaKnown RBP8.01□□□□□ -1.13
CCDC38-204ENST00000546816 PIWIL2Q8TC59 973 aaKnown RBP8.01□□□□□ -1.13
CCDC38-204ENST00000546816 FRMD6Q96NE9 622 aa8.01□□□□□ -1.13
CCDC38-204ENST00000546816 CD320Q9NPF0 282 aa8.01□□□□□ -1.13
CCDC38-204ENST00000546816 MED14OSP0DP75 135 aa8□□□□□ -1.13
CCDC38-204ENST00000546816 RAC2P15153 192 aa8□□□□□ -1.13
CCDC38-204ENST00000546816 ERVFC1P60507 584 aa8□□□□□ -1.13
CCDC38-204ENST00000546816 SEPT6Q14141 434 aa8□□□□□ -1.13
CCDC38-204ENST00000546816 TRAIPQ9BWF2 469 aa8□□□□□ -1.13
CCDC38-204ENST00000546816 EPB41L4BQ9H329 900 aa8□□□□□ -1.13
CCDC38-204ENST00000546816 TMEM59LQ9UK28 342 aa8□□□□□ -1.13
CCDC38-204ENST00000546816 WASH4PA8MWX3 477 aa7.99□□□□□ -1.13
CCDC38-204ENST00000546816 HPXP02790 462 aa7.99□□□□□ -1.13
CCDC38-204ENST00000546816 Q96M66 194 aa7.99□□□□□ -1.13
CCDC38-204ENST00000546816 DPH2Q9BQC3 489 aaPredicted RBP7.99□□□□□ -1.13
CCDC38-204ENST00000546816 DCP1AQ9NPI6 582 aaPredicted RBP7.99□□□□□ -1.13
CCDC38-204ENST00000546816 NPIPB6E9PJ23 425 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms