RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 GRIN1Q05586 938 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
CCDC38-202ENST00000546386 SGMS1Q86VZ5 419 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 TMX4Q9H1E5 349 aaPredicted RBP13.89□□□□□ -0.19
CCDC38-202ENST00000546386 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
CCDC38-202ENST00000546386 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 DOCK2Q92608 1830 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 ZNF831Q5JPB2 1677 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 WNT7AO00755 349 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 BAG3O95817 575 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 LIFRP42702 1097 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 STK38Q15208 465 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 UIMC1Q96RL1 719 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 SCAND2PQ9GZW5 306 aaPredicted RBP13.88□□□□□ -0.19
CCDC38-202ENST00000546386 TSPY26PQ9H489 355 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 BRCA2P51587 3418 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 BIN1O00499 593 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 RHBDL3P58872 404 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 SF3B2Q13435 895 aaKnown RBP13.88□□□□□ -0.19
CCDC38-202ENST00000546386 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
CCDC38-202ENST00000546386 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
CCDC38-202ENST00000546386 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
CCDC38-202ENST00000546386 USP25Q9UHP3 1055 aa13.88□□□□□ -0.19
CCDC38-202ENST00000546386 FLT1P17948 1338 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 WDHD1O75717 1129 aaPredicted RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 ALDH1B1P30837 517 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 RCSD1Q6JBY9 416 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 ZSCAN29Q8IWY8 852 aaPredicted RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 DIS3L2Q8IYB7 885 aaKnown RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 TNMDQ9H2S6 317 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 CABP5Q9NP86 173 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 ATP8A2Q9NTI2 1148 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 USP40Q9NVE5 1235 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 KLRG2A4D1S0 409 aaPredicted RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 NDUFA8P51970 172 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 PDE4BQ07343 736 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 TROAPQ12815 778 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 TRIM29Q14134 588 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 CPLX2Q6PUV4 134 aaKnown RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 USP17L2Q6R6M4 530 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 FSIP1Q8NA03 581 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
CCDC38-202ENST00000546386 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
CCDC38-202ENST00000546386 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
CCDC38-202ENST00000546386 LUZP1Q86V48 1076 aa13.86□□□□□ -0.19
CCDC38-202ENST00000546386 ZNF830Q96NB3 372 aaPredicted RBP13.86□□□□□ -0.19
CCDC38-202ENST00000546386 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
CCDC38-202ENST00000546386 NUP62CLQ9H1M0 184 aa13.86□□□□□ -0.19
CCDC38-202ENST00000546386 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
CCDC38-202ENST00000546386 CFAP45Q9UL16 551 aa13.86□□□□□ -0.19
CCDC38-202ENST00000546386 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
CCDC38-202ENST00000546386 FRMPD2Q68DX3 1309 aaPredicted RBP13.86□□□□□ -0.19
CCDC38-202ENST00000546386 ECE2O60344 883 aa13.86□□□□□ -0.19
CCDC38-202ENST00000546386 LRRC47Q8N1G4 583 aaKnown RBP13.86□□□□□ -0.19
CCDC38-202ENST00000546386 RGL2O15211 777 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 CDK8P49336 464 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 TICAM2Q86XR7 235 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 TRIM22Q8IYM9 498 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 FBXL16Q8N461 479 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 PDILTQ8N807 584 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.85□□□□□ -0.19
CCDC38-202ENST00000546386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC38-202ENST00000546386 ANKRD31Q8N7Z5 1873 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 DPEP1P16444 411 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 PNMA1Q8ND90 353 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
CCDC38-202ENST00000546386 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
CCDC38-202ENST00000546386 ANAPC4Q9UJX5 808 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 PCDHB6Q9Y5E3 794 aa13.85□□□□□ -0.19
CCDC38-202ENST00000546386 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 CLRN2A0PK11 232 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 FMNL1O95466 1100 aaPredicted RBP13.84□□□□□ -0.19
CCDC38-202ENST00000546386 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
CCDC38-202ENST00000546386 PKN1Q16512 942 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 LINC00301Q8NCQ3 95 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 DNAJC25Q9H1X3 360 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 TDRD3Q9H7E2 651 aaKnown RBP13.84□□□□□ -0.19
CCDC38-202ENST00000546386 KAT14Q9H8E8 782 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 RRAGDQ9NQL2 400 aaPredicted RBP13.84□□□□□ -0.19
CCDC38-202ENST00000546386 SLX4Q8IY92 1834 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 GPR75-ASB3A0A0A6YYF3 556 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 AP5Z1O43299 807 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 IFNAR1P17181 557 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 RASA1P20936 1047 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 CDC42EP5Q6NZY7 148 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 USP49Q70CQ1 688 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 CEP95Q96GE4 821 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 EYA3Q99504 573 aa13.84□□□□□ -0.19
CCDC38-202ENST00000546386 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC38-202ENST00000546386 SPTLC2O15270 562 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms