RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 IL15P40933 162 aaPredicted RBP16.69■□□□□ 0.26
HOXC11-202ENST00000546378 SLC35F6Q8N357 371 aa16.69■□□□□ 0.26
HOXC11-202ENST00000546378 GPATCH11Q8N954 259 aa16.69■□□□□ 0.26
HOXC11-202ENST00000546378 CENPHQ9H3R5 247 aa16.69■□□□□ 0.26
HOXC11-202ENST00000546378 ADAM21Q9UKJ8 722 aa16.69■□□□□ 0.26
HOXC11-202ENST00000546378 ANGEL1Q9UNK9 670 aaKnown RBP16.69■□□□□ 0.26
HOXC11-202ENST00000546378 POSTNQ15063 836 aa16.69■□□□□ 0.26
HOXC11-202ENST00000546378 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
HOXC11-202ENST00000546378 REXO1L1PQ8IX06 675 aa16.69■□□□□ 0.26
HOXC11-202ENST00000546378 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 CMA1P23946 247 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 TRIM65Q6PJ69 517 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
HOXC11-202ENST00000546378 AFF2P51816 1311 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 SLC39A14Q15043 492 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 GOLGA6L1Q8N7Z2 621 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 GOLGA1Q92805 767 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 LRP2BPQ9P2M1 347 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 MAN1B1Q9UKM7 699 aa16.68■□□□□ 0.26
HOXC11-202ENST00000546378 NEDD4P46934 1319 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 ERICH2A1L162 156 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 MACROD2A1Z1Q3 448 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 H2AFXP16104 143 aaPredicted RBP16.67■□□□□ 0.26
HOXC11-202ENST00000546378 CRKLP46109 303 aaKnown RBP16.67■□□□□ 0.26
HOXC11-202ENST00000546378 E2F4Q16254 413 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
HOXC11-202ENST00000546378 AK7Q96M32 723 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 ABCB6Q9NP58 842 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
HOXC11-202ENST00000546378 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 ITPK1Q13572 414 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 RRAGBQ5VZM2 374 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 SPECC1LQ69YQ0 1117 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 VSTM4Q8IW00 320 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 KRI1Q8N9T8 703 aaKnown RBP16.67■□□□□ 0.26
HOXC11-202ENST00000546378 CSRNP2Q9H175 543 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 GREM2Q9H772 168 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 MCM7P33993 719 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 MCAMP43121 646 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 TRIM22Q8IYM9 498 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
HOXC11-202ENST00000546378 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.67■□□□□ 0.26
HOXC11-202ENST00000546378 CCDC175P0C221 793 aa16.66■□□□□ 0.26
HOXC11-202ENST00000546378 CYP2C19P33261 490 aa16.66■□□□□ 0.26
HOXC11-202ENST00000546378 PNKPQ96T60 521 aa16.66■□□□□ 0.26
HOXC11-202ENST00000546378 IMPACTQ9P2X3 320 aa16.66■□□□□ 0.26
HOXC11-202ENST00000546378 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
HOXC11-202ENST00000546378 PIH1D3Q9NQM4 214 aaKnown RBP16.66■□□□□ 0.26
HOXC11-202ENST00000546378 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
HOXC11-202ENST00000546378 WTIPA6NIX2 430 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-202ENST00000546378 ARHGAP6O43182 974 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 FOXO4P98177 505 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 RAD9BQ6WBX8 426 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 RAD21O60216 631 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 YEATS4O95619 227 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 ITGA6P23229 1130 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 UBAC1Q9BSL1 405 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 QTRT2Q9H974 415 aaKnown RBP16.65■□□□□ 0.26
HOXC11-202ENST00000546378 POLR3EQ9NVU0 708 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-202ENST00000546378 VPS72Q15906 364 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 IPO4Q8TEX9 1081 aaKnown RBP16.65■□□□□ 0.26
HOXC11-202ENST00000546378 CCDC87Q9NVE4 849 aa16.65■□□□□ 0.26
HOXC11-202ENST00000546378 V9GY48 417 aaPredicted RBP16.65■□□□□ 0.26
HOXC11-202ENST00000546378 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
HOXC11-202ENST00000546378 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.25
HOXC11-202ENST00000546378 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 SLC4A4Q9Y6R1 1079 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 BCL9O00512 1426 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 TPM1P09493 284 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 CXCR5P32302 372 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 BRAPQ7Z569 592 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 NOA1Q8NC60 698 aaKnown RBP16.64■□□□□ 0.25
HOXC11-202ENST00000546378 HSD3B7Q9H2F3 369 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 SMARCAL1Q9NZC9 954 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 EFCAB8A8MWE9 144 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
HOXC11-202ENST00000546378 TAF3Q5VWG9 929 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 TC2NQ8N9U0 490 aa16.64■□□□□ 0.25
HOXC11-202ENST00000546378 PALLDQ8WX93 1383 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 KDM3BQ7LBC6 1761 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 MAP3K15Q6ZN16 1313 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 MYO1CO00159 1063 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 VSNL1P62760 191 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 RTN1Q16799 776 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 MFSD6Q6ZSS7 791 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 APPBP2Q92624 585 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.63■□□□□ 0.25
HOXC11-202ENST00000546378 CYP27A1Q02318 531 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 GIGYF2Q6Y7W6 1299 aaKnown RBP16.63■□□□□ 0.25
HOXC11-202ENST00000546378 SEPT12Q8IYM1 358 aa16.63■□□□□ 0.25
HOXC11-202ENST00000546378 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
HOXC11-202ENST00000546378 A0A1W2PQ27 194 aa16.62■□□□□ 0.25
HOXC11-202ENST00000546378 A0A1W2PQ64 194 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms