RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	MREG	Q8N565	214 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	AEN	Q8WTP8	325 aa	Known RBP	11.46	□□□□□ -0.57
UBC-213	ENST00000546120	DPF2	Q92785	391 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	RHOXF2	Q9BQY4	288 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	JPH2	Q9BR39	696 aa	Predicted RBP	11.46	□□□□□ -0.57
UBC-213	ENST00000546120	NUP58	Q9BVL2	599 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	KAT14	Q9H8E8	782 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.46	□□□□□ -0.57
UBC-213	ENST00000546120	CLIC4	Q9Y696	253 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	CPS1	P31327	1500 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	GOLGA6L10	A0A0M3HER8	536 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	PI4KAP2	A4QPH2	592 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	ANKRD33B	A6NCL7	494 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	GRM8	O00222	908 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	FAM107A	O95990	144 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	GGCX	P38435	758 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	GNGT1	P63211	74 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	CDK17	Q00537	523 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	SAFB	Q15424	915 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
UBC-213	ENST00000546120	HSP90AB2P	Q58FF8	381 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	RILPL1	Q5EBL4	403 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	NBPF6	Q5VWK0	638 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	KCNV1	Q6PIU1	500 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	TMED8	Q6PL24	325 aa	Predicted RBP	11.45	□□□□□ -0.58
UBC-213	ENST00000546120	SLC35F6	Q8N357	371 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	PI4KAP1	Q8N8J0	262 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.45	□□□□□ -0.58
UBC-213	ENST00000546120	EAF2	Q96CJ1	260 aa	Predicted RBP	11.45	□□□□□ -0.58
UBC-213	ENST00000546120	NBPF4	Q96M43	638 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	MTA3	Q9BTC8	594 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	SELENOO	Q9BVL4	669 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	MRPL44	Q9H9J2	332 aa	Known RBP	11.45	□□□□□ -0.58
UBC-213	ENST00000546120	LZTFL1	Q9NQ48	299 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	INTS13	Q9NVM9	706 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	ADD3	Q9UEY8	706 aa	Known RBP	11.45	□□□□□ -0.58
UBC-213	ENST00000546120	LIMA1	Q9UHB6	759 aa	Known RBP	11.45	□□□□□ -0.58
UBC-213	ENST00000546120	PCDHA5	Q9Y5H7	936 aa		11.45	□□□□□ -0.58
UBC-213	ENST00000546120	ABCC12	Q96J65	1359 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	ZMYM6	O95789	1325 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	UBN2	Q6ZU65	1347 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	STK36	Q9NRP7	1315 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120		A0A1W2PQC6	194 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	BIN1	O00499	593 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	TCP1	P17987	556 aa	Known RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120	CYLC1	P35663	651 aa	Predicted RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120	VAV2	P52735	878 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	RCAN1	P53805	252 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	EIF4A1	P60842	406 aa	Known RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120	AKAP17A	Q02040	695 aa	Known RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120	RIPK1	Q13546	671 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	KARS	Q15046	597 aa	Known RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120	LACTB2	Q53H82	288 aa	Predicted RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120	TTC39A	Q5SRH9	613 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	CDKAL1	Q5VV42	579 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	ARHGAP27	Q6ZUM4	889 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	CCDC121	Q6ZUS5	278 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	NOC3L	Q8WTT2	800 aa	Known RBP	11.44	□□□□□ -0.58
UBC-213	ENST00000546120	KAT2B	Q92831	832 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	SGSM3	Q96HU1	749 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	SIL1	Q9H173	461 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	EPC1	Q9H2F5	836 aa		11.44	□□□□□ -0.58
UBC-213	ENST00000546120	USP6	P35125	1406 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120		E7EWF7	191 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	PHACTR2	O75167	634 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	LUC7L3	O95232	432 aa	Known RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	FDPS	P14324	419 aa	Known RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	PRPH	P41219	470 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	PPP1R2	P41236	205 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	NAP1L1	P55209	391 aa	Known RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	ADK	P55263	362 aa	Known RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	RWDD2B	P57060	319 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	NEXN	Q0ZGT2	675 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	PPP2R5B	Q15173	497 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	PTPA	Q15257	358 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	RBBP5	Q15291	538 aa	Known RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	LRIG3	Q6UXM1	1119 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	PARP9	Q8IXQ6	854 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	TRIM58	Q8NG06	486 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	OR8K1	Q8NGG5	319 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	CCDC47	Q96A33	483 aa	Known RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	SYTL4	Q96C24	671 aa	Predicted RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	BOLA2	Q9H3K6	86 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	RMND1	Q9NWS8	449 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	SWAP70	Q9UH65	585 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	MAN1B1	Q9UKM7	699 aa		11.43	□□□□□ -0.58
UBC-213	ENST00000546120	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.43	□□□□□ -0.58
UBC-213	ENST00000546120	GOLGA6L10	A6NI86	522 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	TMEM232	C9JQI7	657 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	ABLIM1	O14639	778 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	USO1	O60763	962 aa	Known RBP	11.42	□□□□□ -0.58
UBC-213	ENST00000546120	GSTA1	P08263	222 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	RBL2	Q08999	1139 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	BIRC3	Q13489	604 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	ZMYM1	Q5SVZ6	1142 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.42	□□□□□ -0.58
UBC-213	ENST00000546120	SHC4	Q6S5L8	630 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	RAD9B	Q6WBX8	426 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	CROCCP2	Q86T23	111 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms