RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 BRAPQ7Z569 592 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 MMRN2Q9H8L6 949 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 POLD4Q9HCU8 107 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 ZNF652Q9Y2D9 606 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 ITSN1Q15811 1721 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 DIP2AQ14689 1571 aa11.13□□□□□ -0.63
TRAF1-203ENST00000546084 SEC31AO94979 1220 aaKnown RBP11.12□□□□□ -0.63
TRAF1-203ENST00000546084 RFC4P35249 363 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 PPARAQ07869 468 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 ZNF569Q5MCW4 686 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 KIAA1328Q86T90 577 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 SLC44A5Q8NCS7 719 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 LOC102724428A0A0B4J2F2 783 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 CLCN6P51797 869 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 SIK1P57059 783 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 TSGA10IPQ3SY00 556 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 FANCBQ8NB91 859 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 LRRN4CLQ8ND94 238 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 TGFBRAP1Q8WUH2 860 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 TRIM47Q96LD4 638 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 CSRNP2Q9H175 543 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 CCDC87Q9NVE4 849 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 TBC1D7Q9P0N9 293 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 CALCOCO1Q9P1Z2 691 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 TECPR2O15040 1411 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 PEAK1Q9H792 1746 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 CCP110O43303 1012 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 USPL1Q5W0Q7 1092 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 ARMCX5Q6P1M9 558 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 NOSTRINQ8IVI9 506 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 SOS2Q07890 1332 aaPredicted RBP11.12□□□□□ -0.63
TRAF1-203ENST00000546084 SPATA31A3Q5VYP0 1347 aa11.12□□□□□ -0.63
TRAF1-203ENST00000546084 STAT6P42226 847 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 NLRP12P59046 1061 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 ETF1P62495 437 aaKnown RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 POSTNQ15063 836 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 BAG1Q99933 345 aaPredicted RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 MYO1BO43795 1136 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 PRDX5P30044 214 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 TFAP4Q01664 338 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 EVX2Q03828 476 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 STRBPQ96SI9 672 aaKnown RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 C3P01024 1663 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 IBSPP21815 317 aaPredicted RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 GYS2P54840 703 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 AXDND1Q5T1B0 1012 aaPredicted RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 DYMQ7RTS9 669 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 IGSF22Q8N9C0 903 aa11.11□□□□□ -0.63
TRAF1-203ENST00000546084 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
TRAF1-203ENST00000546084 EVCP57679 992 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 GPS2Q13227 327 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 ENGASEQ8NFI3 743 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 RTEL1Q9NZ71 1219 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 MEGF6O75095 1541 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 ZSCAN12O43309 604 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 RABL6Q3YEC7 729 aaPredicted RBP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 DNAJC21Q5F1R6 531 aaKnown RBP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 GOLGA6L1Q8N7Z2 621 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 CEP131Q9UPN4 1083 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 KRT2P35908 639 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 EPS15P42566 896 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 EXOSC10Q01780 885 aaKnown RBP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 UBXN1Q04323 297 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 TCP10Q12799 353 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 NEK11Q8NG66 645 aa11.1□□□□□ -0.63
TRAF1-203ENST00000546084 RPGRQ92834 1020 aaKnown RBP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 CRNKL1Q9BZJ0 848 aaKnown RBP11.1□□□□□ -0.63
TRAF1-203ENST00000546084 KIF5CO60282 957 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 TRIM21P19474 475 aaKnown RBP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 KLRK1P26718 216 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 TNNI2P48788 182 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 NAPAP54920 295 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 ASIC1P78348 528 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRAF1-203ENST00000546084 PTGDRQ13258 359 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 MTF1Q14872 753 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 SLC39A14Q15043 492 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 CARD10Q9BWT7 1032 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 CNNM2Q9H8M5 875 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
TRAF1-203ENST00000546084 MACROD2A1Z1Q3 448 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms