RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 IFIT1BQ5T764 474 aaKnown RBP11.89□□□□□ -0.51
CIT-218ENST00000546026 ILDR2Q71H61 639 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 ZNF654Q8IZM8 581 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 NEDD1Q8NHV4 660 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 PRMT6Q96LA8 375 aaPredicted RBP11.89□□□□□ -0.51
CIT-218ENST00000546026 ANP32EQ9BTT0 268 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 FAM198AQ9UFP1 575 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 MTMR6Q9Y217 621 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 ATP6V1DQ9Y5K8 247 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
CIT-218ENST00000546026 COL2A1P02458 1487 aaPredicted RBP11.89□□□□□ -0.51
CIT-218ENST00000546026 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 FZD9O00144 591 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 DDAH1O94760 285 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 TSPY3P0CV98 308 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 TSPY8P0CW00 308 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 EIF6P56537 245 aaKnown RBP11.88□□□□□ -0.51
CIT-218ENST00000546026 NFIAQ12857 509 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 FKBP1CQ5VVH2 108 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 FOXP4Q8IVH2 680 aaPredicted RBP11.88□□□□□ -0.51
CIT-218ENST00000546026 FANCBQ8NB91 859 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 FHDC1Q9C0D6 1143 aaPredicted RBP11.88□□□□□ -0.51
CIT-218ENST00000546026 TDRD3Q9H7E2 651 aaKnown RBP11.88□□□□□ -0.51
CIT-218ENST00000546026 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
CIT-218ENST00000546026 TMOD2Q9NZR1 351 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
CIT-218ENST00000546026 PCDHAC2Q9Y5I4 1007 aa11.88□□□□□ -0.51
CIT-218ENST00000546026 GOLGA6L22H0YM25 854 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 F13A1P00488 732 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
CIT-218ENST00000546026 IFNAR1P17181 557 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 CDC27P30260 824 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 ADD1P35611 737 aaKnown RBP11.87□□□□□ -0.51
CIT-218ENST00000546026 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
CIT-218ENST00000546026 RASSF7Q02833 373 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 NBR1Q14596 966 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 NTRK3Q16288 839 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 RTN1Q16799 776 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 SLC4A8Q2Y0W8 1093 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 MICU3Q86XE3 530 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 DPF2Q92785 391 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
CIT-218ENST00000546026 MAP3K14Q99558 947 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 IL17RBQ9NRM6 502 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 RBM28Q9NW13 759 aaKnown RBP11.87□□□□□ -0.51
CIT-218ENST00000546026 ORC3Q9UBD5 711 aaPredicted RBP11.87□□□□□ -0.51
CIT-218ENST00000546026 PI4KBQ9UBF8 816 aa11.87□□□□□ -0.51
CIT-218ENST00000546026 ZNF70Q9UC06 446 aaPredicted RBP11.87□□□□□ -0.51
CIT-218ENST00000546026 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 NOVP48745 357 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 PRELPP51888 382 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 RCSD1Q6JBY9 416 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 ARHGAP27Q6ZUM4 889 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
CIT-218ENST00000546026 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 SLC44A5Q8NCS7 719 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 CCDC17Q96LX7 622 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 SYT17Q9BSW7 474 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 ATRNL1Q5VV63 1379 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 PLIN4Q96Q06 1357 aa11.86□□□□□ -0.51
CIT-218ENST00000546026 VPS37CA5D8V6 355 aaPredicted RBP11.85□□□□□ -0.51
CIT-218ENST00000546026 H3BQV1 296 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 MYO1BO43795 1136 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 NMT2O60551 498 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 FMNL1O95466 1100 aaPredicted RBP11.85□□□□□ -0.51
CIT-218ENST00000546026 RXRAP19793 462 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 LMNB1P20700 586 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
CIT-218ENST00000546026 TROAPQ12815 778 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 IFFO2Q5TF58 517 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 FOXD4L5Q5VV16 416 aaPredicted RBP11.85□□□□□ -0.51
CIT-218ENST00000546026 SH3BP5LQ7L8J4 393 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 NUP133Q8WUM0 1156 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 FOXD4L4Q8WXT5 416 aaPredicted RBP11.85□□□□□ -0.51
CIT-218ENST00000546026 WASF1Q92558 559 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
CIT-218ENST00000546026 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
CIT-218ENST00000546026 IGKV6D-41A0A0C4DH26 115 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 DDTLA6NHG4 134 aaPredicted RBP11.84□□□□□ -0.51
CIT-218ENST00000546026 DTNBO60941 627 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 SHMT1P34896 483 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 CACNB3P54284 484 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 TCP10Q12799 353 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
CIT-218ENST00000546026 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 TRIM22Q8IYM9 498 aa11.84□□□□□ -0.51
CIT-218ENST00000546026 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
CIT-218ENST00000546026 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms