RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, human

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNN1A-223	ENST00000545605	METTL16	Q86W50	562 aa	Known RBP	13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	STK11IP	Q8N1F8	1099 aa		13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SPRYD3	Q8NCJ5	442 aa		13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	FAM151A	Q8WW52	585 aa		13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	LARP6	Q9BRS8	491 aa	Known RBP	13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	DNAJC18	Q9H819	358 aa		13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	GPHN	Q9NQX3	736 aa	Predicted RBP	13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	BRPF3	Q9ULD4	1205 aa		13.58	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SHTN1	A0MZ66	631 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CLRN2	A0PK11	232 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	ZBTB43	O43298	467 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	DHX16	O60231	1041 aa	Known RBP	13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	GRIN3B	O60391	1043 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TSPY3	P0CV98	308 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TSPY8	P0CW00	308 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SHMT1	P34896	483 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TNNI2	P48788	182 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	HMGN5	P82970	282 aa	Known RBP	13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TCP10	Q12799	353 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	IFIT1B	Q5T764	474 aa	Known RBP	13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	C9orf131	Q5VYM1	1079 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NFXL1	Q6ZNB6	911 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SH3BP5L	Q7L8J4	393 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	MICU3	Q86XE3	530 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	ZNF654	Q8IZM8	581 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NECAB1	Q8N987	351 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	FOXD4L1	Q9NU39	408 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PI4KB	Q9UBF8	816 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	HERC5	Q9UII4	1024 aa	Known RBP	13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CNOT7	Q9UIV1	285 aa	Known RBP	13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	HPS5	Q9UPZ3	1129 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SMC3	Q9UQE7	1217 aa		13.57	□□□□□ -0.24
SCNN1A-223	ENST00000545605	GOLGB1	Q14789	3259 aa	Known RBP	13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PHIP	Q8WWQ0	1821 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	DDTL	A6NHG4	134 aa	Predicted RBP	13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	GOLGA8A	A7E2F4	631 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NOV	P48745	357 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	METAP2	P50579	478 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NUCB2	P80303	420 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	STK3	Q13188	491 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PPP4R3B	Q5MIZ7	849 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	DGKH	Q86XP1	1220 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NSUN7	Q8NE18	718 aa	Known RBP	13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NEDD1	Q8NHV4	660 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SMARCC2	Q8TAQ2	1214 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CCDC17	Q96LX7	622 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CSRNP1	Q96S65	589 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	ZKSCAN3	Q9BRR0	538 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	VEZT	Q9HBM0	779 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	KIF3A	Q9Y496	699 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SLC12A7	Q9Y666	1083 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PITPNM2	Q9BZ72	1349 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	STK36	Q9NRP7	1315 aa		13.56	□□□□□ -0.24
SCNN1A-223	ENST00000545605	IGKV6D-41	A0A0C4DH26	115 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PTPDC1	A2A3K4	754 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TCP10L2	B9ZVM9	353 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605		H7C1D1	291 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CDKL5	O76039	1030 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	EGFR	P00533	1210 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CALM1	P0DP23	149 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CALM2	P0DP24	149 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CALM3	P0DP25	149 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PDIA4	P13667	645 aa	Known RBP	13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TFAP4	Q01664	338 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PPP2R5B	Q15173	497 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NBPF9	Q3BBW0	867 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	FAM47A	Q5JRC9	791 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	RCSD1	Q6JBY9	416 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SYNE3	Q6ZMZ3	975 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	ZFPM1	Q8IX07	1006 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	ANKS1A	Q92625	1134 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TRIM34	Q9BYJ4	488 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SENP2	Q9HC62	589 aa		13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.55	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SSC5D	A1L4H1	1573 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PDC	P20941	246 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	GJB2	P29033	226 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	LMOD1	P29536	600 aa	Predicted RBP	13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	RAB3GAP1	Q15042	981 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	GPR162	Q16538	588 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TATDN1	Q6P1N9	297 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CPLX2	Q6PUV4	134 aa	Known RBP	13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	MAP3K14	Q99558	947 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	NCOA5	Q9HCD5	579 aa	Known RBP	13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	IL17RB	Q9NRM6	502 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PPP2R3B	Q9Y5P8	575 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PARP14	Q460N5	1801 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	PTPRF	P10586	1907 aa		13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	POLR2A	P24928	1970 aa	Known RBP	13.54	□□□□□ -0.24
SCNN1A-223	ENST00000545605	CCDC196	A0A1B0GTZ2	297 aa		13.53	□□□□□ -0.24
SCNN1A-223	ENST00000545605	RTN1	Q16799	776 aa		13.53	□□□□□ -0.24
SCNN1A-223	ENST00000545605	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.53	□□□□□ -0.24
SCNN1A-223	ENST00000545605	SAMD7	Q7Z3H4	446 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms