RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 CDX2Q99626 313 aaPredicted RBP10.75□□□□□ -0.69
NPIPB4-221ENST00000545367 LBHD1Q9BQE6 289 aaPredicted RBP10.75□□□□□ -0.69
NPIPB4-221ENST00000545367 BDP1A6H8Y1 2624 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 FAM196BA6NMK8 535 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 FOSL2P15408 326 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 ZKSCAN1P17029 563 aaPredicted RBP10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 PUM3Q15397 648 aaKnown RBP10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 SLC4A10Q6U841 1118 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 KLHDC4Q8TBB5 520 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 KAZALD1Q96I82 304 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 ZSWIM6Q9HCJ5 1215 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 USP40Q9NVE5 1235 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 KIF16BQ96L93 1317 aa10.74□□□□□ -0.69
NPIPB4-221ENST00000545367 PDE8BO95263 885 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 CCND3P30281 292 aaPredicted RBP10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 GCLCP48506 637 aaPredicted RBP10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 HMGCS2P54868 508 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 PICALMQ13492 652 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 SH3BP5LQ7L8J4 393 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 SOCS4Q8WXH5 440 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 MRIQ9BWK5 157 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 BICC1Q9H694 974 aaKnown RBP10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 GJD2Q9UKL4 321 aa10.73□□□□□ -0.69
NPIPB4-221ENST00000545367 GBF1Q92538 1859 aa10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 DDTLA6NHG4 134 aaPredicted RBP10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 PEX10O60683 326 aa10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 LDHBP07195 334 aaKnown RBP10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 IFIT1P09914 478 aaKnown RBP10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 SLC5A1P13866 664 aa10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 ASCC2Q9H1I8 757 aaPredicted RBP10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 REV3LO60673 3130 aa10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 ZNF236Q9UL36 1845 aa10.72□□□□□ -0.69
NPIPB4-221ENST00000545367 TMEM265A0A087WTH1 108 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 CTNND1O60716 968 aaKnown RBP10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 ENTPD3O75355 529 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 NBPF7P0C2Y1 421 aaPredicted RBP10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 FGFR2P21802 821 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 DSG2Q14126 1118 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 PDE3AQ14432 1141 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 CCL14Q16627 93 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 C9orf50Q5SZB4 431 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 SRCIN1Q9C0H9 1055 aa10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 TTYH1Q9H313 450 aaPredicted RBP10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 DDX4Q9NQI0 724 aaKnown RBP10.71□□□□□ -0.69
NPIPB4-221ENST00000545367 MYO9BQ13459 2157 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 PLXNA1Q9UIW2 1896 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 A0A0G2JMZ2 1700 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 GAKO14976 1311 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 ALDH1L1O75891 902 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 PLA2G5P39877 138 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 IRX3P78415 501 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 CACNB2Q08289 660 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 SPP2Q13103 211 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 PABPC4Q13310 644 aaKnown RBP eCLIP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 PPP1R15BQ5SWA1 713 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 DZIP1Q86YF9 867 aaKnown RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 USP38Q8NB14 1042 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 SYMPKQ92797 1274 aaKnown RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 APBA2Q99767 749 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 NUDT12Q9BQG2 462 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 SENP6Q9GZR1 1112 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 PRDM5Q9NQX1 630 aaPredicted RBP10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 MORF4L1Q9UBU8 362 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
NPIPB4-221ENST00000545367 IL16Q14005 1332 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 RTP1P59025 263 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 EXOSC9Q06265 439 aaKnown RBP10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 MTMR2Q13614 643 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 SHHQ15465 462 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 TJAP1Q5JTD0 557 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 ZNF280CQ8ND82 737 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 TXNRD2Q9NNW7 524 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 ATP11BQ9Y2G3 1177 aa10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 MYO5AQ9Y4I1 1855 aaKnown RBP10.69□□□□□ -0.7
NPIPB4-221ENST00000545367 SALL1Q9NSC2 1324 aa10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 VAMP4O75379 141 aa10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 XRCC5P13010 732 aaKnown RBP10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 BTDP43251 543 aa10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 LPIN2Q92539 896 aa10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 CHD9Q3L8U1 2897 aa10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 MYH1P12882 1939 aa10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 XIRP2A4UGR9 3374 aa10.68□□□□□ -0.7
NPIPB4-221ENST00000545367 MROH7-TTC4A0A0A0MT08 1334 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 UTYO14607 1347 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 CHD7Q9P2D1 2997 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 RGS2P41220 211 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 PHKA1P46020 1223 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms