RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 ADGRL1O94910 1474 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 FGD5Q6ZNL6 1462 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 LINC00854A0A1B0GVQ3 168 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 TMEM221A6NGB7 291 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 LSM1O15116 133 aaKnown RBP5.79□□□□□ -1.48
UBE4A-203ENST00000545354 YEATS4O95619 227 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 CLNS1AP54105 237 aaKnown RBP5.79□□□□□ -1.48
UBE4A-203ENST00000545354 SNX16P57768 344 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 SEPT6Q14141 434 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 LRRFIP1Q32MZ4 808 aaKnown RBP5.79□□□□□ -1.48
UBE4A-203ENST00000545354 IRGCQ6NXR0 463 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 TNIP2Q8NFZ5 429 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 GIPC2Q8TF65 315 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 APPBP2Q92624 585 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 ZNF75CPQ92670 426 aaPredicted RBP5.79□□□□□ -1.48
UBE4A-203ENST00000545354 ATP6V0A1Q93050 837 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 CTAGE1Q96RT6 745 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 KIF9Q9HAQ2 790 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 AVENQ9NQS1 362 aaPredicted RBP5.79□□□□□ -1.48
UBE4A-203ENST00000545354 SEPT11Q9NVA2 429 aaKnown RBP5.79□□□□□ -1.48
UBE4A-203ENST00000545354 STK39Q9UEW8 545 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 EIF3AQ14152 1382 aaKnown RBP5.79□□□□□ -1.48
UBE4A-203ENST00000545354 WDR97A6NE52 1622 aa5.79□□□□□ -1.48
UBE4A-203ENST00000545354 HNRNPCL2B2RXH8 293 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 POLR3GO15318 223 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 SART1O43290 800 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 KPNA6O60684 536 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 HNRNPCL1O60812 293 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 RGS20O76081 388 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 TUBB4AP04350 444 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 ZNF16P17020 682 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 GNAT2P19087 354 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 ATP5DP30049 168 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 HNRNPH1P31943 449 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 BASP1P80723 227 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 LMNB2Q03252 620 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 ITIH3Q06033 890 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 PPIDQ08752 370 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 DDX10Q13206 875 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 COG2Q14746 738 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 RABL6Q3YEC7 729 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 MEX3CQ5U5Q3 659 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 CDCA2Q69YH5 1023 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 ADALQ6DHV7 355 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 PDXDC1Q6P996 788 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 MTHFD1LQ6UB35 978 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 LRRC31Q6UY01 552 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 CDKL2Q92772 493 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 ABCG4Q9H172 646 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 VPS33BQ9H267 617 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 TMEM165Q9HC07 324 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 DNAAF2Q9NVR5 837 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 EVLQ9UI08 416 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 RRBP1Q9P2E9 1410 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 GAKO14976 1311 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 ERICH2A1L162 156 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 TTC34A8MYJ7 566 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 PPP1R12BO60237 982 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 SNX2O60749 519 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 PENKP01210 267 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 SLC8A1P32418 973 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 MAP3K9P80192 1104 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 DR1Q01658 176 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 DMPKQ09013 629 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 BRD3Q15059 726 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 CREB3L3Q68CJ9 461 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 POTEEQ6S8J3 1075 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 CENPQQ7L2Z9 268 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 NLRP9Q7RTR0 991 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 HDGFL2Q7Z4V5 671 aaPredicted RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 SPNS2Q8IVW8 549 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 SLC7A5P1Q8MH63 180 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 RNF10Q8N5U6 811 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 CCDC112Q8NEF3 446 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 OR8K1Q8NGG5 319 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 SLC35B4Q969S0 331 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 SNX21Q969T3 373 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 NSRP1Q9H0G5 558 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 PARVGQ9HBI0 331 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 KMT5AQ9NQR1 393 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 MIS18AQ9NYP9 233 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 CLIC5Q9NZA1 410 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 TFIP11Q9UBB9 837 aaKnown RBP5.78□□□□□ -1.48
UBE4A-203ENST00000545354 PRKAB1Q9Y478 270 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 LMTK3Q96Q04 1460 aa5.78□□□□□ -1.48
UBE4A-203ENST00000545354 NDUFAB1O14561 156 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 MUSKO15146 869 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 ORC4O43929 436 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 S100A6P06703 90 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 GBP2P32456 591 aaPredicted RBP5.77□□□□□ -1.49
UBE4A-203ENST00000545354 PHEXP78562 749 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 SCRN1Q12765 414 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 KIF5AQ12840 1032 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 SKIV2LQ15477 1246 aaKnown RBP5.77□□□□□ -1.49
UBE4A-203ENST00000545354 MCM10Q7L590 875 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 CCAR2Q8N163 923 aaKnown RBP5.77□□□□□ -1.49
UBE4A-203ENST00000545354 CARNMT1Q8N4J0 409 aa5.77□□□□□ -1.49
UBE4A-203ENST00000545354 PRPF38AQ8NAV1 312 aaKnown RBP5.77□□□□□ -1.49
UBE4A-203ENST00000545354 SPC24Q8NBT2 197 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms