RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
C2CD3-220ENST00000544293 PHIPQ8WWQ0 1821 aa11.75□□□□□ -0.53
C2CD3-220ENST00000544293 PABPC4Q13310 644 aaKnown RBP eCLIP11.75□□□□□ -0.53
C2CD3-220ENST00000544293 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
C2CD3-220ENST00000544293 ALDH1L2Q3SY69 923 aa11.75□□□□□ -0.53
C2CD3-220ENST00000544293 GPR142Q7Z601 462 aa11.75□□□□□ -0.53
C2CD3-220ENST00000544293 ADGRA1Q86SQ6 560 aa11.75□□□□□ -0.53
C2CD3-220ENST00000544293 SPATA5Q8NB90 893 aa11.75□□□□□ -0.53
C2CD3-220ENST00000544293 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
C2CD3-220ENST00000544293 NOB1Q9ULX3 412 aaKnown RBP11.75□□□□□ -0.53
C2CD3-220ENST00000544293 COL2A1P02458 1487 aaPredicted RBP11.75□□□□□ -0.53
C2CD3-220ENST00000544293 MGAMO43451 1857 aa11.74□□□□□ -0.53
C2CD3-220ENST00000544293 MAP4K4O95819 1239 aaPredicted RBP11.74□□□□□ -0.53
C2CD3-220ENST00000544293 MCAMP43121 646 aa11.74□□□□□ -0.53
C2CD3-220ENST00000544293 PPP4CP60510 307 aa11.74□□□□□ -0.53
C2CD3-220ENST00000544293 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
C2CD3-220ENST00000544293 ERVK-24P63145 666 aa11.74□□□□□ -0.53
C2CD3-220ENST00000544293 TRPV1Q8NER1 839 aa11.74□□□□□ -0.53
C2CD3-220ENST00000544293 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
C2CD3-220ENST00000544293 HERC5Q9UII4 1024 aaKnown RBP11.74□□□□□ -0.53
C2CD3-220ENST00000544293 SPTBN5Q9NRC6 3674 aaKnown RBP11.74□□□□□ -0.53
C2CD3-220ENST00000544293 C19orf81C9J6K1 198 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 E9PSI1 815 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 GDF11O95390 407 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 ARID4AP29374 1257 aaPredicted RBP11.73□□□□□ -0.53
C2CD3-220ENST00000544293 MTX1Q13505 466 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 PLEKHH3Q7Z736 793 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 TEX11Q8IYF3 940 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 SOCS4Q8WXH5 440 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 SENP6Q9GZR1 1112 aaPredicted RBP11.73□□□□□ -0.53
C2CD3-220ENST00000544293 NDUFB9Q9Y6M9 179 aa11.73□□□□□ -0.53
C2CD3-220ENST00000544293 USP17L10C9JJH3 530 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 LDHCP07864 332 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 ZKSCAN1P17029 563 aaPredicted RBP11.72□□□□□ -0.53
C2CD3-220ENST00000544293 MAPK4P31152 587 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
C2CD3-220ENST00000544293 MVPQ14764 893 aaKnown RBP11.72□□□□□ -0.53
C2CD3-220ENST00000544293 FOXP4Q8IVH2 680 aaPredicted RBP11.72□□□□□ -0.53
C2CD3-220ENST00000544293 NPLOC4Q8TAT6 608 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 NEUROD6Q96NK8 337 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 CDX2Q99626 313 aaPredicted RBP11.72□□□□□ -0.53
C2CD3-220ENST00000544293 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 AS3MTQ9HBK9 375 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 PALD1Q9ULE6 856 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 PTPRFP10586 1907 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 PLXNB2O15031 1838 aa11.72□□□□□ -0.53
C2CD3-220ENST00000544293 ANP32CO43423 234 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 ASNSP08243 561 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 RGS2P41220 211 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
C2CD3-220ENST00000544293 GSTO1P78417 241 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 MAP2K5Q13163 448 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 SHHQ15465 462 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 MAPKAPK5Q8IW41 473 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
C2CD3-220ENST00000544293 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
C2CD3-220ENST00000544293 DHX36Q9H2U1 1008 aaKnown RBP11.71□□□□□ -0.53
C2CD3-220ENST00000544293 TTYH1Q9H313 450 aaPredicted RBP11.71□□□□□ -0.53
C2CD3-220ENST00000544293 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 AATFQ9NY61 560 aaKnown RBP eCLIP11.71□□□□□ -0.53
C2CD3-220ENST00000544293 TMOD4Q9NZQ9 345 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 RAI14Q9P0K7 980 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 BTBD7Q9P203 1132 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 ZBTB21Q9ULJ3 1066 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 AKAP2Q9Y2D5 859 aa11.71□□□□□ -0.53
C2CD3-220ENST00000544293 FLT1P17948 1338 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 SRGAP3O43295 1099 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 CYP2E1P05181 493 aaPredicted RBP11.7□□□□□ -0.54
C2CD3-220ENST00000544293 HOXC6P09630 235 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 PTPREP23469 700 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 CATSPERGQ6ZRH7 1159 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 C12orf42Q96LP6 360 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 APBA2Q99767 749 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 PAGR1Q9BTK6 254 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 SNRKQ9NRH2 765 aa11.7□□□□□ -0.54
C2CD3-220ENST00000544293 DDX20Q9UHI6 824 aaKnown RBP11.7□□□□□ -0.54
C2CD3-220ENST00000544293 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
C2CD3-220ENST00000544293 PNMA6EA0A0J9YXQ4 647 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 ITGB8P26012 769 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 CYP2C19P33261 490 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 DYNLL1P63167 89 aaKnown RBP11.69□□□□□ -0.54
C2CD3-220ENST00000544293 TATDN1Q6P1N9 297 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 ACER1Q8TDN7 264 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 LPAR1Q92633 364 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 GINM1Q9NU53 330 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 TNNQ9UQP3 1299 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 RABGAP1Q9Y3P9 1069 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
C2CD3-220ENST00000544293 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 GH2P01242 217 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 CYBAP13498 195 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 RTP1P59025 263 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 PDE3AQ14432 1141 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 GRB14Q14449 540 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 LBX2Q6XYB7 198 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 308.4 ms