RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 ERVK-9P63128 1117 aa11□□□□□ -0.65
CD4-211ENST00000543755 ERVK-24P63145 666 aa11□□□□□ -0.65
CD4-211ENST00000543755 CCNA1P78396 465 aa11□□□□□ -0.65
CD4-211ENST00000543755 TRIM26Q12899 539 aaPredicted RBP11□□□□□ -0.65
CD4-211ENST00000543755 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
CD4-211ENST00000543755 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
CD4-211ENST00000543755 BUD13Q9BRD0 619 aaKnown RBP eCLIP11□□□□□ -0.65
CD4-211ENST00000543755 PAGR1Q9BTK6 254 aa11□□□□□ -0.65
CD4-211ENST00000543755 MTIF3Q9H2K0 278 aaKnown RBP11□□□□□ -0.65
CD4-211ENST00000543755 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
CD4-211ENST00000543755 IVNS1ABPQ9Y6Y0 642 aa11□□□□□ -0.65
CD4-211ENST00000543755 REV3LO60673 3130 aa11□□□□□ -0.65
CD4-211ENST00000543755 MROH5Q6ZUA9 1318 aa11□□□□□ -0.65
CD4-211ENST00000543755 DOCK1Q14185 1865 aa11□□□□□ -0.65
CD4-211ENST00000543755 CHD9Q3L8U1 2897 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 PEX10O60683 326 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 PQBP1O60828 265 aaKnown RBP10.99□□□□□ -0.65
CD4-211ENST00000543755 FOXO4P98177 505 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 CALD1Q05682 793 aaKnown RBP10.99□□□□□ -0.65
CD4-211ENST00000543755 PPIGQ13427 754 aaKnown RBP eCLIP10.99□□□□□ -0.65
CD4-211ENST00000543755 ANO1Q5XXA6 986 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 ZFPM1Q8IX07 1006 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 SLC44A5Q8NCS7 719 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 LINS1Q8NG48 757 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 OSBPL5Q9H0X9 879 aaPredicted RBP10.99□□□□□ -0.65
CD4-211ENST00000543755 TXNRD2Q9NNW7 524 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 ATRNL1Q5VV63 1379 aa10.99□□□□□ -0.65
CD4-211ENST00000543755 DOCK2Q92608 1830 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 RLFQ13129 1914 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 USP17L5A8MUK1 530 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 DCDC2CA8MYV0 355 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 APBB1O00213 710 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 GFRA3O60609 400 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 ALADP13716 330 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 CYP2C19P33261 490 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 GNAI1P63096 354 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 ANKS1AQ92625 1134 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 HLA-CQ95604 372 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 PORCNQ9H237 461 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 MYO9BQ13459 2157 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 CFAP54Q96N23 3096 aa10.98□□□□□ -0.65
CD4-211ENST00000543755 USP34Q70CQ2 3546 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 SLC15A5A6NIM6 579 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
CD4-211ENST00000543755 PPP2R2DQ66LE6 453 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 PSRC1Q6PGN9 363 aaPredicted RBP10.97□□□□□ -0.65
CD4-211ENST00000543755 GJD3Q8N144 294 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 IDI2Q9BXS1 227 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 IFT57Q9NWB7 429 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 FLRT1Q9NZU1 646 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 RBPJLQ9UBG7 517 aa10.97□□□□□ -0.65
CD4-211ENST00000543755 PHIPQ8WWQ0 1821 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 LOC285556D6RIA3 1793 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 SEPT4O43236 478 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 LDHBP07195 334 aaKnown RBP10.96□□□□□ -0.65
CD4-211ENST00000543755 IFIT1P09914 478 aaKnown RBP10.96□□□□□ -0.65
CD4-211ENST00000543755 CYBAP13498 195 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 PICALMQ13492 652 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 MTMR2Q13614 643 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 LRRC41Q15345 812 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 Q3C1V9 767 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 METTL24Q5JXM2 366 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 TMEM199Q8N511 208 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 C8orf58Q8NAV2 365 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 DNAAF4Q8WXU2 420 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 RUNDC1Q96C34 613 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 YBX2Q9Y2T7 364 aaKnown RBP10.96□□□□□ -0.65
CD4-211ENST00000543755 NDUFB9Q9Y6M9 179 aa10.96□□□□□ -0.65
CD4-211ENST00000543755 PLXNA1Q9UIW2 1896 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 DDTLA6NHG4 134 aaPredicted RBP10.95□□□□□ -0.66
CD4-211ENST00000543755 C19orf81C9J6K1 198 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 TBC1D12O60347 775 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 TIMP1P01033 207 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 HOXC6P09630 235 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 PTPREP23469 700 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 BACE1P56817 501 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
CD4-211ENST00000543755 TMEM240Q5SV17 173 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 MFSD5Q6N075 450 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 RNF180Q86T96 592 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 DPP9Q86TI2 863 aa10.95□□□□□ -0.66
CD4-211ENST00000543755 RFXAPO00287 272 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 SLC4A2P04920 1241 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 ACRP10323 421 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 KRT40Q6A162 431 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 SH3BP5LQ7L8J4 393 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 ERMP1Q7Z2K6 904 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 TRPV1Q8NER1 839 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 TOX2Q96NM4 488 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 PHF24Q9UPV7 400 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 RABGAP1Q9Y3P9 1069 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 MTCH2Q9Y6C9 303 aa10.94□□□□□ -0.66
CD4-211ENST00000543755 ZNF521Q96K83 1311 aa10.93□□□□□ -0.66
CD4-211ENST00000543755 PDE8BO95263 885 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms