RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 ADGRA1Q86SQ6 560 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 AMOTL1Q8IY63 956 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 SH3TC2Q8TF17 1288 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 DDRGK1Q96HY6 314 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 WDR18Q9BV38 432 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 LRRCC1Q9C099 1032 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 ANTXR1Q9H6X2 564 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
NUP43-206ENST00000543637 NDUFB9Q9Y6M9 179 aa8.67□□□□□ -1.02
NUP43-206ENST00000543637 ATP5JP18859 108 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 EN2P19622 333 aaPredicted RBP8.66□□□□□ -1.02
NUP43-206ENST00000543637 BACE1P56817 501 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 CERKLQ49MI3 558 aaPredicted RBP8.66□□□□□ -1.02
NUP43-206ENST00000543637 CCDC84Q86UT8 332 aaPredicted RBP8.66□□□□□ -1.02
NUP43-206ENST00000543637 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 GPATCH3Q96I76 525 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 BOLA2Q9H3K6 86 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 CWC22Q9HCG8 908 aaKnown RBP8.66□□□□□ -1.02
NUP43-206ENST00000543637 PAG1Q9NWQ8 432 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 SERPINB13Q9UIV8 391 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
NUP43-206ENST00000543637 ZNF532Q9HCE3 1301 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 ADCY3O60266 1144 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 GDF11O95390 407 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 CAPN2P17655 700 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 USP14P54578 494 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 RAB3GAP1Q15042 981 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 ABCB5Q2M3G0 1257 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 TREML2Q5T2D2 321 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 PRPF38BQ5VTL8 546 aaKnown RBP8.65□□□□□ -1.02
NUP43-206ENST00000543637 USP17L2Q6R6M4 530 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
NUP43-206ENST00000543637 SIRT2Q8IXJ6 389 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 SLAIN1Q8ND83 568 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 GCC1Q96CN9 775 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 FEZ1Q99689 392 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 RNF208Q9H0X6 261 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 ASCC2Q9H1I8 757 aaPredicted RBP8.65□□□□□ -1.02
NUP43-206ENST00000543637 EHD4Q9H223 541 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.65□□□□□ -1.02
NUP43-206ENST00000543637 NAV1Q8NEY1 1877 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 SIPA1L1O43166 1804 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 LOC285556D6RIA3 1793 aa8.65□□□□□ -1.02
NUP43-206ENST00000543637 ADGRA2Q96PE1 1338 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 MPHOSPH10O00566 681 aaKnown RBP8.64□□□□□ -1.03
NUP43-206ENST00000543637 GH2P01242 217 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 PDE6AP16499 860 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 HOXA7P31268 230 aaPredicted RBP8.64□□□□□ -1.03
NUP43-206ENST00000543637 FLT3LGP49771 235 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 CAP1Q01518 475 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 PRKCZQ05513 592 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 MTMR2Q13614 643 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 RRP1BQ14684 758 aaKnown RBP8.64□□□□□ -1.03
NUP43-206ENST00000543637 FAM110CQ1W6H9 321 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 LRRFIP1Q32MZ4 808 aaKnown RBP8.64□□□□□ -1.03
NUP43-206ENST00000543637 TATDN1Q6P1N9 297 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 PXYLP1Q8TE99 480 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 GTF3C2Q8WUA4 911 aaPredicted RBP8.64□□□□□ -1.03
NUP43-206ENST00000543637 ATP8A2Q9NTI2 1148 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 ZBTB21Q9ULJ3 1066 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 GABRQQ9UN88 632 aa8.64□□□□□ -1.03
NUP43-206ENST00000543637 BAZ2AQ9UIF9 1905 aaKnown RBP8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L15C9J2P7 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L13C9JLJ4 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L11C9JVI0 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L18D6R9N7 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L22D6RA61 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L17D6RBQ6 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L19D6RCP7 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L20D6RJB6 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 TFRCP02786 760 aaKnown RBP8.63□□□□□ -1.03
NUP43-206ENST00000543637 CCL5P13501 91 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 CTGFP29279 349 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 USP17L24Q0WX57 530 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 C20orf194Q5TEA3 1177 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 GPRC5AQ8NFJ5 357 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 P2RX7Q99572 595 aaKnown RBP8.63□□□□□ -1.03
NUP43-206ENST00000543637 HAUS7Q99871 368 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 RIOK1Q9BRS2 568 aaKnown RBP8.63□□□□□ -1.03
NUP43-206ENST00000543637 SWAP70Q9UH65 585 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 DOCK3Q8IZD9 2030 aa8.63□□□□□ -1.03
NUP43-206ENST00000543637 SMARCA5O60264 1052 aaPredicted RBP8.62□□□□□ -1.03
NUP43-206ENST00000543637 GLRX3O76003 335 aaKnown RBP8.62□□□□□ -1.03
NUP43-206ENST00000543637 GJB1P08034 283 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 ADD2P35612 726 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 PLCD1P51178 756 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 HERVK_113P62684 666 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 CCNA1P78396 465 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 IRF5Q13568 498 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 MTFR1Q15390 333 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 ZYXQ15942 572 aaKnown RBP8.62□□□□□ -1.03
NUP43-206ENST00000543637 DPF3Q92784 378 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 PAGR1Q9BTK6 254 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 HTATIP2Q9BUP3 242 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms