RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 AFMP43652 599 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 TUBB2AQ13885 445 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 KANK3Q6NY19 840 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 TUBB2BQ9BVA1 445 aa26.95■■□□□ 1.9
SHD-201ENST00000543264 CAMTA1Q9Y6Y1 1673 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 CSB-PGBD3P0DP91 1061 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 SPATA1Q5VX52 437 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 EFCC1Q9HA90 598 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 ADD3Q9UEY8 706 aaKnown RBP26.94■■□□□ 1.9
SHD-201ENST00000543264 CD44P16070 742 aaKnown RBP26.94■■□□□ 1.9
SHD-201ENST00000543264 CASP1P29466 404 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 ADD2P35612 726 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 NR5A1Q13285 461 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 CSRNP2Q9H175 543 aa26.94■■□□□ 1.9
SHD-201ENST00000543264 IFIT3O14879 490 aaKnown RBP26.93■■□□□ 1.9
SHD-201ENST00000543264 IDH1O75874 414 aaKnown RBP26.93■■□□□ 1.9
SHD-201ENST00000543264 FMNL1O95466 1100 aaPredicted RBP26.93■■□□□ 1.9
SHD-201ENST00000543264 MCAMP43121 646 aa26.93■■□□□ 1.9
SHD-201ENST00000543264 NAPGQ99747 312 aaPredicted RBP26.93■■□□□ 1.9
SHD-201ENST00000543264 MAP3K15Q6ZN16 1313 aa26.93■■□□□ 1.9
SHD-201ENST00000543264 FXR1P51114 621 aaKnown RBP eCLIP26.93■■□□□ 1.9
SHD-201ENST00000543264 TUBB4BP68371 445 aa26.93■■□□□ 1.9
SHD-201ENST00000543264 RILPL1Q5EBL4 403 aa26.93■■□□□ 1.9
SHD-201ENST00000543264 PBX1P40424 430 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 KRT28Q7Z3Y7 464 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 MSL3Q8N5Y2 521 aaKnown RBP26.92■■□□□ 1.9
SHD-201ENST00000543264 SRPRBQ9Y5M8 271 aaKnown RBP26.92■■□□□ 1.9
SHD-201ENST00000543264 MEGF6O75095 1541 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 NOP2P46087 812 aaKnown RBP26.92■■□□□ 1.9
SHD-201ENST00000543264 FILIP1LQ4L180 1135 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 SMYD4Q8IYR2 804 aaPredicted RBP26.92■■□□□ 1.9
SHD-201ENST00000543264 NOA1Q8NC60 698 aaKnown RBP26.92■■□□□ 1.9
SHD-201ENST00000543264 SPATA20Q8TB22 786 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 WASF1Q92558 559 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 GBP3Q9H0R5 595 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 TTF2Q9UNY4 1162 aaKnown RBP26.92■■□□□ 1.9
SHD-201ENST00000543264 SYNRGQ9UMZ2 1314 aa26.92■■□□□ 1.9
SHD-201ENST00000543264 SGMS1Q86VZ5 419 aa26.91■■□□□ 1.9
SHD-201ENST00000543264 CMTR1Q8N1G2 835 aaKnown RBP26.91■■□□□ 1.9
SHD-201ENST00000543264 FAM71BQ8TC56 605 aa26.91■■□□□ 1.9
SHD-201ENST00000543264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.91■■□□□ 1.9
SHD-201ENST00000543264 ZSWIM5Q9P217 1185 aa26.91■■□□□ 1.9
SHD-201ENST00000543264 LRRIQ3A6PVS8 624 aaPredicted RBP26.91■■□□□ 1.9
SHD-201ENST00000543264 GYPCP04921 128 aa26.91■■□□□ 1.9
SHD-201ENST00000543264 PIP4K2BP78356 416 aa26.91■■□□□ 1.9
SHD-201ENST00000543264 NOM1Q5C9Z4 860 aaKnown RBP26.91■■□□□ 1.9
SHD-201ENST00000543264 WWC3Q9ULE0 1092 aa26.91■■□□□ 1.9
SHD-201ENST00000543264 PLEKHG2Q9H7P9 1386 aa26.91■■□□□ 1.9
SHD-201ENST00000543264 COBLO75128 1261 aa26.9■■□□□ 1.9
SHD-201ENST00000543264 CNGA4Q8IV77 575 aa26.9■■□□□ 1.9
SHD-201ENST00000543264 GOLGA6L1Q8N7Z2 621 aa26.9■■□□□ 1.9
SHD-201ENST00000543264 ZNF579Q8NAF0 562 aaKnown RBP26.9■■□□□ 1.9
SHD-201ENST00000543264 WHAMMP3Q1A5X7 153 aa26.9■■□□□ 1.9
SHD-201ENST00000543264 CERS3Q8IU89 383 aa26.9■■□□□ 1.9
SHD-201ENST00000543264 STK36Q9NRP7 1315 aa26.9■■□□□ 1.9
SHD-201ENST00000543264 ECM29Q5VYK3 1845 aa26.9■■□□□ 1.9
SHD-201ENST00000543264 RPS6KA5O75582 802 aa26.89■■□□□ 1.9
SHD-201ENST00000543264 IFNAR1P17181 557 aa26.89■■□□□ 1.9
SHD-201ENST00000543264 CCT6AP40227 531 aaKnown RBP26.89■■□□□ 1.9
SHD-201ENST00000543264 CTDSPL2Q05D32 466 aa26.89■■□□□ 1.9
SHD-201ENST00000543264 NCAPH2Q6IBW4 605 aa26.89■■□□□ 1.9
SHD-201ENST00000543264 CTAGE1Q96RT6 745 aa26.89■■□□□ 1.9
SHD-201ENST00000543264 CABP5Q9NP86 173 aa26.89■■□□□ 1.9
SHD-201ENST00000543264 LRRC31Q6UY01 552 aa26.89■■□□□ 1.89
SHD-201ENST00000543264 OXER1Q8TDS5 423 aa26.89■■□□□ 1.89
SHD-201ENST00000543264 FOXP1Q9H334 677 aaPredicted RBP26.89■■□□□ 1.89
SHD-201ENST00000543264 ZNF532Q9HCE3 1301 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 ANKRD65E5RJM6 399 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 CUL4BQ13620 913 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 TRIM22Q8IYM9 498 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 EPSTI1Q96J88 318 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 FAM204AQ9H8W3 233 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 PIH1D3Q9NQM4 214 aaKnown RBP26.88■■□□□ 1.89
SHD-201ENST00000543264 ERVK-24P63145 666 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 CDKAL1Q5VV42 579 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 MYO6Q9UM54 1294 aa26.88■■□□□ 1.89
SHD-201ENST00000543264 A0A087X0B3 334 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 CDC25AP30304 524 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 LIFRP42702 1097 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 METTL24Q5JXM2 366 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 ZKSCAN3Q9BRR0 538 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 PLEKHA4Q9H4M7 779 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 RNF216Q9NWF9 866 aaPredicted RBP26.87■■□□□ 1.89
SHD-201ENST00000543264 EIF3CLB5ME19 914 aaKnown RBP26.87■■□□□ 1.89
SHD-201ENST00000543264 TMTC1Q8IUR5 882 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 EIF3CQ99613 913 aaKnown RBP26.87■■□□□ 1.89
SHD-201ENST00000543264 SLF1Q9BQI6 1058 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 ACBD3Q9H3P7 528 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 CEP131Q9UPN4 1083 aa26.87■■□□□ 1.89
SHD-201ENST00000543264 ZNF330Q9Y3S2 320 aaPredicted RBP26.87■■□□□ 1.89
SHD-201ENST00000543264 MYH8P13535 1937 aa26.86■■□□□ 1.89
SHD-201ENST00000543264 FAM89AQ96GI7 184 aa26.86■■□□□ 1.89
SHD-201ENST00000543264 MKRN1Q9UHC7 482 aaKnown RBP26.86■■□□□ 1.89
SHD-201ENST00000543264 ARHGAP25P42331 645 aa26.86■■□□□ 1.89
SHD-201ENST00000543264 AKAP17AQ02040 695 aaKnown RBP26.86■■□□□ 1.89
SHD-201ENST00000543264 IFIT5Q13325 482 aaKnown RBP26.86■■□□□ 1.89
SHD-201ENST00000543264 CCDC51Q96ER9 411 aa26.86■■□□□ 1.89
SHD-201ENST00000543264 MYH7P12883 1935 aa26.85■■□□□ 1.89
SHD-201ENST00000543264 RNF225M0QZC1 329 aaPredicted RBP26.85■■□□□ 1.89
SHD-201ENST00000543264 MAGEA9P43362 315 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms