RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 DPH2Q9BQC3 489 aaPredicted RBP6.63□□□□□ -1.35
MDM2-229ENST00000543046 BRMS1Q9HCU9 246 aa6.63□□□□□ -1.35
MDM2-229ENST00000543046 REV1Q9UBZ9 1251 aa6.63□□□□□ -1.35
MDM2-229ENST00000543046 SCO2A0A1W2PP80 73 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 HTR3BO95264 441 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 FOSL1P15407 271 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 HOXA10P31260 410 aaPredicted RBP6.62□□□□□ -1.35
MDM2-229ENST00000543046 SSTR4P31391 388 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 CD97P48960 835 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 SEZ6Q53EL9 994 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 TMEM201Q5SNT2 666 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 INTS5Q6P9B9 1019 aaKnown RBP6.62□□□□□ -1.35
MDM2-229ENST00000543046 XAGE3Q8WTP9 111 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 NKD1Q969G9 470 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 LRRC4CQ9HCJ2 640 aa6.62□□□□□ -1.35
MDM2-229ENST00000543046 SLITRK5O94991 958 aa6.61□□□□□ -1.35
MDM2-229ENST00000543046 MED26O95402 600 aa6.61□□□□□ -1.35
MDM2-229ENST00000543046 LRP8Q14114 963 aa6.61□□□□□ -1.35
MDM2-229ENST00000543046 SLITRK4Q8IW52 837 aa6.61□□□□□ -1.35
MDM2-229ENST00000543046 FAM13CQ8NE31 585 aa6.61□□□□□ -1.35
MDM2-229ENST00000543046 MIPEPQ99797 713 aa6.61□□□□□ -1.35
MDM2-229ENST00000543046 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.61□□□□□ -1.35
MDM2-229ENST00000543046 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
MDM2-229ENST00000543046 UPK3BL1B0FP48 263 aa6.6□□□□□ -1.35
MDM2-229ENST00000543046 UPK3BL2E5RIL1 263 aa6.6□□□□□ -1.35
MDM2-229ENST00000543046 EOMESO95936 686 aa6.6□□□□□ -1.35
MDM2-229ENST00000543046 TCF3P15923 654 aa6.6□□□□□ -1.35
MDM2-229ENST00000543046 MCM4P33991 863 aa6.6□□□□□ -1.35
MDM2-229ENST00000543046 TGIF2Q9GZN2 237 aa6.6□□□□□ -1.35
MDM2-229ENST00000543046 KIAA1324LA8MWY0 1029 aaPredicted RBP6.59□□□□□ -1.35
MDM2-229ENST00000543046 E9PSI1 815 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 ATE1O95260 518 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 ZNF165P49910 485 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
MDM2-229ENST00000543046 CLCQ05315 142 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 RAD51AP2Q09MP3 1159 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 PAK2Q13177 524 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 LETMD1Q6P1Q0 360 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 GK5Q6ZS86 529 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 FAM214BQ7L5A3 538 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 REXO1Q8N1G1 1221 aaKnown RBP6.59□□□□□ -1.35
MDM2-229ENST00000543046 FAM181AQ8N9Y4 354 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 RIN3Q8TB24 985 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 HEXIM2Q96MH2 286 aaKnown RBP6.59□□□□□ -1.35
MDM2-229ENST00000543046 EHMT1Q9H9B1 1298 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 ZC3H7BQ9UGR2 993 aaKnown RBP6.59□□□□□ -1.35
MDM2-229ENST00000543046 KLHL3Q9UH77 587 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 GTF2IRD1Q9UHL9 959 aa6.59□□□□□ -1.35
MDM2-229ENST00000543046 CHURC1-FNTBB4DL54 471 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 HYAL3O43820 417 aaPredicted RBP6.58□□□□□ -1.36
MDM2-229ENST00000543046 DNAJA2O60884 412 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 SPINK2P20155 84 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 MLECQ14165 292 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 ARTNQ5T4W7 220 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 ARHGAP27Q6ZUM4 889 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 DTX1Q86Y01 620 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 PRDM5Q9NQX1 630 aaPredicted RBP6.58□□□□□ -1.36
MDM2-229ENST00000543046 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
MDM2-229ENST00000543046 U3KQE9 123 aa6.58□□□□□ -1.36
MDM2-229ENST00000543046 IGF2BP3O00425 579 aaKnown RBP eCLIP6.57□□□□□ -1.36
MDM2-229ENST00000543046 ERCC5P28715 1186 aaPredicted RBP6.57□□□□□ -1.36
MDM2-229ENST00000543046 OXCT1P55809 520 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 CDH24Q86UP0 819 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 SLFN12Q8IYM2 578 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 CYB5D2Q8WUJ1 264 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 ACBD3Q9H3P7 528 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 CCSER2Q9H7U1 834 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 MKNK2Q9HBH9 465 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 ZFP64Q9NPA5 681 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 MAPK8IP1Q9UQF2 711 aa6.57□□□□□ -1.36
MDM2-229ENST00000543046 SLC22A31A6NKX4 558 aa6.56□□□□□ -1.36
MDM2-229ENST00000543046 CEACAM5P06731 702 aa6.56□□□□□ -1.36
MDM2-229ENST00000543046 ZNF746Q6NUN9 644 aaPredicted RBP6.56□□□□□ -1.36
MDM2-229ENST00000543046 PLD6Q8N2A8 252 aaKnown RBP6.56□□□□□ -1.36
MDM2-229ENST00000543046 Q8N3U1 123 aa6.56□□□□□ -1.36
MDM2-229ENST00000543046 NETO1Q8TDF5 533 aa6.56□□□□□ -1.36
MDM2-229ENST00000543046 GPRASP2Q96D09 838 aa6.56□□□□□ -1.36
MDM2-229ENST00000543046 GMIPQ9P107 970 aa6.56□□□□□ -1.36
MDM2-229ENST00000543046 CNTNAP4Q9C0A0 1308 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 ITIH2P19823 946 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 GJA8P48165 433 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 SFRP5Q5T4F7 317 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 OVOS1Q6IE37 1185 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 PHACTR4Q8IZ21 702 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 DNAJB8Q8NHS0 232 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 RASGRP4Q8TDF6 673 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 PPP1R13LQ8WUF5 828 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 SPATA32Q96LK8 384 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 IGSF5Q9NSI5 407 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 BSDC1Q9NW68 430 aaPredicted RBP6.55□□□□□ -1.36
MDM2-229ENST00000543046 CEP131Q9UPN4 1083 aa6.55□□□□□ -1.36
MDM2-229ENST00000543046 GNAT3A8MTJ3 354 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 CYP7A1P22680 504 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 IFI16Q16666 785 aaKnown RBP6.54□□□□□ -1.36
MDM2-229ENST00000543046 ARSHQ5FYA8 562 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 BAHD1Q8TBE0 780 aaPredicted RBP6.54□□□□□ -1.36
MDM2-229ENST00000543046 CCDC74BQ96LY2 380 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 FERD3LQ96RJ6 166 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms