RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 DCP1AQ9NPI6 582 aaPredicted RBP15.78■□□□□ 0.12
SLC3A2-220ENST00000542922 NCAPHQ15003 741 aa15.77■□□□□ 0.12
SLC3A2-220ENST00000542922 FILIP1Q7Z7B0 1213 aa15.77■□□□□ 0.12
SLC3A2-220ENST00000542922 JMYQ8N9B5 988 aa15.77■□□□□ 0.12
SLC3A2-220ENST00000542922 MTA3Q9BTC8 594 aa15.77■□□□□ 0.12
SLC3A2-220ENST00000542922 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.77■□□□□ 0.12
SLC3A2-220ENST00000542922 FAM237AA0A1B0GTK4 181 aa15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 SEMA3EO15041 775 aa15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 CUTAO60888 179 aa15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 NFIXQ14938 502 aa15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 SAFBQ15424 915 aaKnown RBP eCLIP15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 GRIK5Q16478 980 aa15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 NOM1Q5C9Z4 860 aaKnown RBP15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 IFIT1BQ5T764 474 aaKnown RBP15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 NAT10Q9H0A0 1025 aaKnown RBP15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 FBXO2Q9UK22 296 aaPredicted RBP15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.11
SLC3A2-220ENST00000542922 CCDC196A0A1B0GTZ2 297 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 WNT7AO00755 349 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 RGL2O15211 777 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 NPHP1O15259 732 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 FGRP09769 529 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 ZRSR1Q15695 479 aaKnown RBP15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 ANKRD2Q9GZV1 360 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 FOXP1Q9H334 677 aaPredicted RBP15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 KCNH3Q9ULD8 1083 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 RCAN1P53805 252 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 TROAPQ12815 778 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 KRI1Q8N9T8 703 aaKnown RBP15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 TIGD1Q96MW7 591 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 HSD3B7Q9H2F3 369 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 CABP5Q9NP86 173 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 TUBE1Q9UJT0 475 aa15.76■□□□□ 0.11
SLC3A2-220ENST00000542922 RBM6P78332 1123 aaKnown RBP15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 USP49Q70CQ1 688 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 LRRC8AQ8IWT6 810 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 MYRIPQ8NFW9 859 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 BPIFA3Q9BQP9 254 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 RNF26Q9BY78 433 aaPredicted RBP15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 V9GY48 417 aaPredicted RBP15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 RFC4P35249 363 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 KRBA2Q6ZNG9 492 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 CATIPQ7Z7H3 387 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 CRNKL1Q9BZJ0 848 aaKnown RBP15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 XPO4Q9C0E2 1151 aaKnown RBP15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 LRRC4BQ9NT99 713 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 IFNKQ9P0W0 207 aa15.75■□□□□ 0.11
SLC3A2-220ENST00000542922 ADAMTS3O15072 1205 aa15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 USP17L8P0C7I0 530 aa15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 ATP1A3P13637 1013 aa15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 LMOD1P29536 600 aaPredicted RBP15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 IQCA1Q86XH1 822 aa15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 C16orf45Q96MC5 204 aaPredicted RBP15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 FAM13BQ9NYF5 915 aa15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 PDS5AQ29RF7 1337 aaKnown RBP15.74■□□□□ 0.11
SLC3A2-220ENST00000542922 USP27XA6NNY8 438 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 SMC2O95347 1197 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 VEGFAP15692 232 aaPredicted RBP15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 BMP6P22004 513 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 PTPREP23469 700 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 RILPL1Q5EBL4 403 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 CNNM3Q8NE01 707 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 ANKIB1Q9P2G1 1089 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 PCDHA5Q9Y5H7 936 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 CCZ1BP86790 482 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 CCZ1P86791 482 aaPredicted RBP15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 PDE4BQ07343 736 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 DIXDC1Q155Q3 683 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 TMTC3Q6ZXV5 915 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 DZIP1Q86YF9 867 aaKnown RBP15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 PHF20Q9BVI0 1012 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
SLC3A2-220ENST00000542922 ORC4O43929 436 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 AKAP17AQ02040 695 aaKnown RBP15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 NPY5RQ15761 445 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 TRAPPC3LQ5T215 181 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 PDILTQ8N807 584 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 MCM9Q9NXL9 1143 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 SERTAD1Q9UHV2 236 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 POLR2DO15514 142 aaKnown RBP15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 PRPF3O43395 683 aaKnown RBP15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 MDM2Q00987 491 aaPredicted RBP15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 GRAPQ13588 217 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 PTPN21Q16825 1174 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 SH3RF3Q8TEJ3 882 aaPredicted RBP15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 DYNLL2Q96FJ2 89 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 PRIMPOLQ96LW4 560 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 CSRNP2Q9H175 543 aa15.72■□□□□ 0.11
SLC3A2-220ENST00000542922 DYNC1I1O14576 645 aa15.71■□□□□ 0.11
SLC3A2-220ENST00000542922 HSP90AA2PQ14568 343 aaPredicted RBP15.71■□□□□ 0.11
SLC3A2-220ENST00000542922 ZNF827Q17R98 1081 aa15.71■□□□□ 0.11
SLC3A2-220ENST00000542922 RCSD1Q6JBY9 416 aa15.71■□□□□ 0.11
SLC3A2-220ENST00000542922 CNBD1Q8NA66 436 aa15.71■□□□□ 0.11
SLC3A2-220ENST00000542922 DPF2Q92785 391 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms