RNA–Protein interactions for RNA: ENST00000542832.1

DDX47-208, Transcript of DEAD-box helicase 47, human

TSL 5

Gene DDX47, Length 554 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX47-208	ENST00000542832	HOOK2	Q96ED9	719 aa		10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	TTC14	Q96N46	770 aa		10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	MCM9	Q9NXL9	1143 aa		10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	PI4KB	Q9UBF8	816 aa		10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	CNOT7	Q9UIV1	285 aa	Known RBP	10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	PALD1	Q9ULE6	856 aa		10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	JAG2	Q9Y219	1238 aa		10.43	□□□□□ -0.74
DDX47-208	ENST00000542832	COL2A1	P02458	1487 aa	Predicted RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	PRKAB2	O43741	272 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	POLR3D	P05423	398 aa	Predicted RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	HLA-DOA	P06340	250 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	CAST	P20810	708 aa	Known RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	RPS6KB1	P23443	525 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	TNNI2	P48788	182 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	RCAN1	P53805	252 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	SART3	Q15020	963 aa	Known RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	ZC3H15	Q8WU90	426 aa	Known RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	SDR42E1	Q8WUS8	393 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	FAM151A	Q8WW52	585 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	DDX27	Q96GQ7	796 aa	Known RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	INTS4	Q96HW7	963 aa	Known RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	PRMT6	Q96LA8	375 aa	Predicted RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	CCDC17	Q96LX7	622 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	JAKMIP1	Q96N16	626 aa	Known RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	LARP6	Q9BRS8	491 aa	Known RBP	10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	SLC4A5	Q9BY07	1137 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	MYOZ2	Q9NPC6	264 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	PDRG1	Q9NUG6	133 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	TCP11L1	Q9NUJ3	509 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	LIMCH1	Q9UPQ0	1083 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	PSME4	Q14997	1843 aa		10.42	□□□□□ -0.74
DDX47-208	ENST00000542832	ATRNL1	Q5VV63	1379 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	ROBO3	Q96MS0	1386 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	FLT1	P17948	1338 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832		F8W031	263 aa	Predicted RBP	10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	WNT10B	O00744	389 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	EVI5	O60447	810 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	SCNN1D	P51172	638 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	PRELP	P51888	382 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	MAP3K10	Q02779	954 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	RASSF7	Q02833	373 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	MFSD10	Q14728	455 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	ADCK5	Q3MIX3	580 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	IQCA1	Q86XH1	822 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	HSCB	Q8IWL3	235 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	RGS22	Q8NE09	1264 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	ZNF274	Q96GC6	653 aa	Predicted RBP	10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	CWC22	Q9HCG8	908 aa	Known RBP	10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	GINM1	Q9NU53	330 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	GPRC5D	Q9NZD1	345 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	HERC5	Q9UII4	1024 aa	Known RBP	10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	PPP2R3B	Q9Y5P8	575 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	MAST2	Q6P0Q8	1798 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	MYH2	Q9UKX2	1941 aa		10.41	□□□□□ -0.74
DDX47-208	ENST00000542832	PITPNM2	Q9BZ72	1349 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	SCN9A	Q15858	1988 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	ERICH2	A1L162	156 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	GLTPD2	A6NH11	291 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	MINDY4B	A8MYZ0	360 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832		K7ELQ4	463 aa	Predicted RBP	10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	DHX16	O60231	1041 aa	Known RBP	10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	GABPA	Q06546	454 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	C9orf131	Q5VYM1	1079 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	C16orf86	Q6ZW13	317 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	SGMS1	Q86VZ5	419 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	DGKH	Q86XP1	1220 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	ANKS1A	Q92625	1134 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	MXD3	Q9BW11	206 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	RNF181	Q9P0P0	153 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	ZSWIM5	Q9P217	1185 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	SERPINB13	Q9UIV8	391 aa		10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
DDX47-208	ENST00000542832	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.4	□□□□□ -0.75
DDX47-208	ENST00000542832	DICER1	Q9UPY3	1922 aa	Known RBP	10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	IQCA1L	A6NCM1	817 aa		10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	PTPRE	P23469	700 aa		10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	LMOD1	P29536	600 aa	Predicted RBP	10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	GMPS	P49915	693 aa	Predicted RBP	10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	USP50	Q70EL3	339 aa	Predicted RBP	10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	PNMA8A	Q86V59	439 aa	Predicted RBP	10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	MAP3K14	Q99558	947 aa		10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	TBC1D2	Q9BYX2	928 aa		10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	MKNK2	Q9HBH9	465 aa		10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	ADARB2	Q9NS39	739 aa	Known RBP	10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	ZNF70	Q9UC06	446 aa	Predicted RBP	10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	SYNPO2	Q9UMS6	1093 aa		10.39	□□□□□ -0.75
DDX47-208	ENST00000542832	FGD1	P98174	961 aa		10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	CUL4A	Q13619	759 aa		10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	TATDN1	Q6P1N9	297 aa		10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	STOX1	Q6ZVD7	989 aa		10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	MAPKAPK5	Q8IW41	473 aa		10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	IGDCC4	Q8TDY8	1250 aa		10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	NBPF3	Q9H094	633 aa		10.38	□□□□□ -0.75
DDX47-208	ENST00000542832	TDRD3	Q9H7E2	651 aa	Known RBP	10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms